-
<title>Sensing – Background – TUDA iGEM 2021</title>
<link rel="canonical" href="./sensing-background" />
53 KB (7,122 words) - 16:29, 20 October 2021
-
...ost_type menu-item-object-page menu-item-159"><a href="./sensing">Pathogen Sensing</a></li>
...tadt-blocks-nav-heading"><h2 class="section" id="pathogensensing">Pathogen sensing</h2></div>
64 KB (8,992 words) - 19:12, 20 October 2021
-
....This construct is derived from...the inducible promoter of the lux quorum sensing system of Vibrio fischeri ...inducible promoter see...']"},{"machine":"BBa_
1.16 MB (178,107 words) - 18:53, 7 August 2021
-
<title>Sensing – Circuit – TUDA iGEM 2021</title>
<link rel="canonical" href="./sensing-circuit" />
44 KB (5,953 words) - 16:29, 20 October 2021
-
...ost_type menu-item-object-page menu-item-159"><a href="./
sensing">Pathogen
Sensing</a></li>
...mbled our <strong><a href="#pathogensensing" class="ek-link">pathogen
sensing</a> circuit</strong> using GoldenBraid 2.0 cloning. <strong>Functionality o
54 KB (7,522 words) - 16:29, 20 October 2021
-
...i>. Combined with the observed high AHL sensitivity, we showed that quorum sensing might be a good mechanism to base this safety circuit on.
<h3>Quorum sensing</h3>
64 KB (8,444 words) - 16:44, 2 December 2021
-
...intestine [1,2]. To proof IBDetection, we characterized the tetrathionate sensing TtrS/R system, reproduced the ultrasound-based ARG1 reporter system, and tr
...<h2 class="text-start fw-bolder tab" style="color: #680505">TtrS/R sensing system</h2>
36 KB (4,623 words) - 14:48, 21 October 2021
-
...ost_type menu-item-object-page menu-item-159"><a href="./sensing">Pathogen Sensing</a></li>
...our kill-switch.</span></strong> The kill-switch is based on a ComX quorum sensing system. 1) If the cell stays in the biofilm, the ComX concentration is high
99 KB (13,795 words) - 19:10, 20 October 2021
-
...<a class="nav-link" href="#Subtitle2">Oxidative Stress
Sensing</a>
...<a class="nav-link" href="#Subtitle3">Interferon-gamma
Sensing</a>
79 KB (9,984 words) - 21:07, 21 October 2021
-
...tural chemotaxis pathway to AI-2 of our ECN. AI-2 is the only known quorum sensing signal secreted by H. pylori and also a chemoattractant signal for E. coli.
This ability also plays a role in the quorum sensing (QS), a cell to cell communication process within the population of bacteri
105 KB (13,494 words) - 20:06, 21 October 2021
-
...ost_type menu-item-object-page menu-item-159"><a href="./sensing">Pathogen Sensing</a></li>
...trong> that triggers bacteriophage release upon induction through a quorum sensing (QS) signal. Knowledge of the relationship between the number of QS signali
65 KB (8,850 words) - 16:38, 20 October 2021
-
...ost_type menu-item-object-page menu-item-159"><a href="./sensing">Pathogen Sensing</a></li>
...n of <strong>metabolic dependency</strong> and the usage of<strong> quorum sensing </strong>or<strong> surface proteins.</strong> Furthermore, to ensure that
191 KB (25,186 words) - 16:41, 20 October 2021
-
...<li><a id="run2" class="scrollID" onclick="scrollToID('run2Section')">Sensing</a></li>
...</b>. Staphylococcus aureus itself is a gram-positive bacteria. Its quorum-sensing unit will be more easily expressed on another gram-positive bacteria than a
55 KB (7,093 words) - 15:56, 17 December 2021
-
<li class="mark" id="mark2">The Scheme of Quorum Sensing Model</li>
<li class="mark" id="mark4">Simulation of Quorum Sensing Model</li>
28 KB (2,977 words) - 12:17, 14 September 2021
-
...ensing"><span class="toc-number">3.2.</span> <span class="toc-text">Oxygen
sensing</span></a></li><li class="toc-item toc-level-3"><a class="toc-link" href="#
...en
sensing</h5><p>The goal of this function is to monitor wound healing by
sensing changes in the oxygen concentration in the wound.<br/>Generally, it is not
42 KB (5,793 words) - 23:16, 15 December 2021
-
<a class="nav-link" href="#Subtitle3">Sensing for Stress Biomarkers</a>
...ve oxygen species (ROS) and IFN-γ through the oxidative stress and IFN-γ sensing systems and produce the taurine production enzymes. Finally, with math-base
28 KB (3,467 words) - 07:18, 8 December 2021
-
<a id="zone3-2">Quorum sensing</a>
...e, multivirus detection would be realized. Moreover, with LuxI/LuxR quorum sensing system from <span style="font-style: italic;">E. coli</span> used to improv
18 KB (2,271 words) - 03:11, 22 October 2021
-
...a> page. The results for each of the three major characterizations (TtrS/R sensing system, ARG1 reporter system, and the entire sensor) will be discussed in t
...arious experiments, resulting in a full dose-response curve for the TtrS/R sensing system, which detects Ttr and produces sfGFP as output (n=1). Besides, for
31 KB (3,916 words) - 15:09, 21 October 2021
-
...e="Abstract"></a>Abstract</h3><p>We built an ODE-based model of the Oxygen
Sensing system to simulate the system’s response to oxygen: some genes are expres
...Aim" title="Aim"></a>Aim</h3><p>This model aims to confirm that our Oxygen
Sensing system will respond to oxygen. Although we can predict that the system can
563 KB (66,273 words) - 06:27, 11 December 2021
-
  To incorporate quorum sensing, dental pathogen inhibition, and dental restoration into <i>E. coli</i>, we
</svg>Figure 1. Biobrick design overview. (A)Quorum sensing sequence (B) Inhibition sequence (C) Restoration sequence</div>
39 KB (4,562 words) - 11:37, 12 December 2021
-
...ed that Hidro can be implemented in diverse scenarios, such as heavy metal sensing, food-quality detection, drug secretion, etc.</p>
...vironment that can be infused with nutrients, allowing for cell growth and sensing, while also providing protection against environmental hazards.</p>
57 KB (7,240 words) - 08:18, 23 November 2021
-
...itch. The cell density can be ‘sensed’ by using quorum
sensing. Quorum
sensing is the ability of microorganisms to
...exchanging signaling molecules [24]. In <i>Vibrio fischeri</i> the quorum-
sensing molecule (AHL) is produced by the LuxI (<a href="http://parts.igem.org/Part
93 KB (12,813 words) - 14:27, 2 December 2021
-
<a id="zone3-6">2021 Quorum sensing seminar</a>
<strong class="smallTitle">2021 Quorum sensing seminar</strong>
24 KB (2,994 words) - 17:46, 21 October 2021
-
<p id="re_8">[8]Shong, J.; Collins, C. H., Quorum sensing-modulated AND-gate promoters control gene
sensing molecule (CAI-1), we engineered the metabolic pathways of <i>E. coli</i> to
46 KB (5,069 words) - 03:59, 22 October 2021
-
<title>Pathogen Sensing – TUDA iGEM 2021</title>
<link rel="canonical" href="./sensing" />
27 KB (3,318 words) - 16:29, 20 October 2021
-
...d to be heavily used in future patient care. Specifically, electrochemical sensing technologies are getting attention due to their label-free capability and r
...e channel for placement of the electrodes and to allow for electrochemical sensing (middle) and a final reservoir with rounded and interlocked hexagon micropi
168 KB (22,723 words) - 02:02, 17 December 2021
-
...aderlink" href="#Goal" title="Goal"></a>Goal</h4><p>To construct an oxygen sensing system using oxygen-responsive promoters pAnb1 and pRox1 from <em>Saccharom
.../em> BY4741 strain, we constructed the yeast strains which have the oxygen sensing system.</p>
30 KB (4,302 words) - 06:29, 11 December 2021
-
...ing Theme Meet Up, we found that both of our teams were involved in quorum sensing design, so we exchanged the methods of and precautions for co-cultivation o
18 KB (2,869 words) - 02:45, 25 September 2021
-
...ost_type menu-item-object-page menu-item-159"><a href="./sensing">Pathogen Sensing</a></li>
...ng> secreted by the pathogens for intercellular communication. The initial sensing triggers a defense reaction cascade within the sleeper cells. This cascade
58 KB (7,417 words) - 16:28, 20 October 2021
-
<a id="zone3-5">Model 2 Quorum Sensing System</a>
...gn" class="href1">design</a> of our project is based on AHL-induced quorum sensing (QS) system to amplify the detection effect of engineered bacteria on virus
33 KB (4,658 words) - 03:30, 22 October 2021
-
...ing Theme Meet Up, we found that both of our teams were involved in quorum sensing design, so we exchanged the methods of and precautions for co-cultivation o
18 KB (2,868 words) - 08:57, 2 October 2021
-
<a id="zone3-6">2021 Quorum sensing seminar</a>
<strong class="smallTitle">2021 Quorum sensing seminar</strong>
24 KB (3,020 words) - 15:37, 14 October 2021
-
<a id="zone3-5">Model 2 Quorum Sensing System</a>
...gn" class="href1">design</a> of our project is based on AHL-induced quorum sensing system to amplify the detection effect of engineered bacteria on viruses. T
33 KB (4,661 words) - 06:55, 16 October 2021
-
...,null),"[8] Yang Fang, Zhangle, et al. Progress in the study of population sensing system in Pseudomonas aeruginosa. China Journal of Antibiotics. 2012, 37(1)
17 KB (2,633 words) - 08:32, 21 October 2021
-
...,null),"[8] Yang Fang, Zhangle, et al. Progress in the study of population sensing system in Pseudomonas aeruginosa. China Journal of Antibiotics. 2012, 37(1)
17 KB (2,632 words) - 03:36, 21 October 2021
-
...,null),"[8] Yang Fang, Zhangle, et al. Progress in the study of population sensing system in Pseudomonas aeruginosa. China Journal of Antibiotics. 2012, 37(1)
17 KB (2,632 words) - 03:39, 21 October 2021
-
...,null),"[8] Yang Fang, Zhangle, et al. Progress in the study of population sensing system in Pseudomonas aeruginosa. China Journal of Antibiotics. 2012, 37(1)
17 KB (2,631 words) - 04:01, 21 October 2021
-
...,null),"[8] Yang Fang, Zhangle, et al. Progress in the study of population sensing system in Pseudomonas aeruginosa. China Journal of Antibiotics. 2012, 37(1)
17 KB (2,667 words) - 16:47, 21 October 2021
-
...ailable research, our project’s objective is to design a specific quorum sensing system that “rapidly” detects naturally occurring bacteria in food/beve
<h2>Quorum Sensing With Autoinducer II</h2>
6 KB (909 words) - 02:05, 22 October 2021
-
...Y., Ajmal, M., Chen, J. L., & Yu, D. (2017). Molecular Mechanism of Quorum-Sensing in Enterococcus faecalis: Its Role in Virulence and Therapeutic Approaches.
21 KB (3,215 words) - 02:44, 25 September 2021
-
...ight be extremely low in practical application. Thus, we focused on quorum sensing.<br>
We selected LuxI/LuxR quorum sensing system in <span style="font-style: italic;">E. coli</span>.<br><br>
23 KB (2,720 words) - 03:20, 22 October 2021
-
<a href="#Quorum
sensing"><span>Quorum
sensing</span></a></li>
<div class="subtitle" id="Quorum
sensing">
13 KB (1,668 words) - 04:01, 22 October 2021
-
...Y., Ajmal, M., Chen, J. L., & Yu, D. (2017). Molecular Mechanism of Quorum-Sensing in Enterococcus faecalis: Its Role in Virulence and Therapeutic Approaches.
21 KB (3,215 words) - 08:56, 2 October 2021
-
...Y., Ajmal, M., Chen, J. L., & Yu, D. (2017). Molecular Mechanism of Quorum-Sensing in Enterococcus faecalis: Its Role in Virulence and Therapeutic Approaches.
21 KB (3,215 words) - 11:41, 8 October 2021
-
2021 iGEM Quorum Sensing Science Symposium
...rated with BUCT, Jilin_China, and NEU_CHINA by organizing 2021 iGEM Quorum-sensing Science Symposium.
21 KB (2,447 words) - 12:46, 21 October 2021
-
...Y., Ajmal, M., Chen, J. L., & Yu, D. (2017). Molecular Mechanism of Quorum-Sensing in Enterococcus faecalis: Its Role in Virulence and Therapeutic Approaches.
21 KB (3,213 words) - 09:47, 16 October 2021
-
...Y., Ajmal, M., Chen, J. L., & Yu, D. (2017). Molecular Mechanism of Quorum-Sensing in Enterococcus faecalis: Its Role in Virulence and Therapeutic Approaches.
21 KB (3,214 words) - 14:11, 17 October 2021
-
...Y., Ajmal, M., Chen, J. L., & Yu, D. (2017). Molecular Mechanism of Quorum-Sensing in Enterococcus faecalis: Its Role in Virulence and Therapeutic Approaches.
21 KB (3,213 words) - 04:35, 18 October 2021
-
...solve this problem, we improved the current biobrick by adding the quorum sensing system.
<strong class="smallTitle">Quorum Sensing System</strong>
10 KB (1,190 words) - 16:52, 21 October 2021
-
<a class="nav-link" href="#Subtitle2">
Sensing Systems</a>
<p>  We engineered <i>E. coli</i> Nissle 1917 to have two
sensing systems, which are induced by stress biomarkers interferon-gamma (IFN-γ) a
24 KB (3,559 words) - 00:03, 5 December 2021
