During our project, for the execution of our experiments, we designed and submitted to iGEM Registry
of Standard Biological Parts
7 parts in total: 6 basic parts
(BBa_K3840000,
BBa_K3840420,
BBa_K3840040,
BBa_K3840666,
BBa_K3840069,
BBa_K3840004)
and 1 composite part (BBa_K3840312) which is the synthesized by
the previous individual parts.
More specifically, 4 of the basic parts that were included in our project were designed by members
of our team,
while 2 of them were formed by modifying some already existing parts from previous years.
A short description of our part collection can be seen below.
More information for each part can be accessed by clicking on the part names.
Part Number | Type | Description | Length |
---|---|---|---|
BBa_K3840000 | Protein Domain | Lamp-2b Signalling Peptide | 84 |
BBa_K3840420 | Signalling | CAP(Chondrocyte Affinity Peptide) | 66 |
BBa_K3840040 | Reporter | Green fluorescent Protein | 714 |
BBa_K3840666 | Coding | Lamp-2b chain | 1149 |
BBa_K3840069 | RNA | MicroRNA 140 | 100 |
BBa_K3840004 | Protein Domain | Flexible linker | 30 |
BBa_K3840312 | Composite | SP-CAP-GFP-Lamp2b-mir140 | 2787 |
The parts that were generated by our team are:
• BBa_K3840000
• BBa_K3840420
• BBa_K3840666
• BBa_K3840666
• BBa_K3840069
Our composite part, BBa_K3840312,
is related to the production of exosomes with a guiding tag (Chondrocyte Affinity Peptide) on their
surface to target
specifically chondrocytes. The exosomes produced are also fused with a GFP protein on their surface
in order to allow an easy quantification, and they can also be easily located if their distribution
is required. When this part is expressed, a microRNA (mir-140) is produced, which is
distributed to the produced exosomes, so that it can be eventually released inside the
chondrocytes.
The last two parts we used, BBa_K3840004,
BBa_K3840040, were based on
already existing parts on iGEM from previous years,
BBa_K1486004
and BBa_E0040 respectively which
underwent a codon optimization for Homo Sapiens, as our parts are planned to be expressed in human
cell lines.