Difference between revisions of "Team:GreatBay SCIE/Description"

 
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             <a href="https://2021.igem.org/Team:GreatBay_SCIE">Home</a>
 
             <a href="https://2021.igem.org/Team:GreatBay_SCIE">Home</a>
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                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Design">Design</a></li>
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                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Design">Design</a></li>  
<li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Results">Results</a></li>     
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        <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Proof_Of_Concept">Proof of Concept</a></li> 
<li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Engineering">Engineering</a></li>
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        <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Results">Results</a></li>     
<li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Parts">Parts</a></li>
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        <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Engineering">Engineering</a></li>
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        <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Parts">Parts</a></li>
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Implementation">Implementation</a></li>   
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Implementation">Implementation</a></li>   
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Contribution">Contribution</a></li>   
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Contribution">Contribution</a></li>   
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             <a href="https://2021.igem.org/Team:GreatBay_SCIE/Experiments">Lab</a>
 
             <a href="https://2021.igem.org/Team:GreatBay_SCIE/Experiments">Lab</a>
 
             <ul>
 
             <ul>
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                <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Experiments">Experimental Design</a></li>
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                <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Results">Results</a></li> 
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Safety">Safety</a></li>
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Safety">Safety</a></li>
             
 
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Notebook">Lab Notes</a></li>
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Notebook">Lab Notes</a></li>
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Protocol">Protocol</a></li>
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Protocol">Protocol</a></li>
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             <ul>
 
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                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Model">Overview</a></li>
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Model">Overview</a></li>
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Optimum_Aptamer_Concentration">Optimum Aptamer Concentration</a></li>
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                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Optimum_Aptamer_Concentration" >Optimum Liposome-Aptamer Ratio</a></li>
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Drug_Loading">Drug Loading</a></li>
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Drug_Loading">Drug Loading</a></li>
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/3D_Model">3D Models</a></li>
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                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Dissociation_constant">Dissociation Constant</a></li>
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<li><a href="https://2021.igem.org/Team:GreatBay_SCIE/3D_Model">3D Models</a></li>
  
 
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             <a href="https://2021.igem.org/Team:GreatBay_SCIE/Human_Practices">Human Practices</a>
 
             <a href="https://2021.igem.org/Team:GreatBay_SCIE/Human_Practices">Human Practices</a>
 
             <ul>
 
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<li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Human_Practices">Integrated Human Practices</a></li>
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Communication">Public Engagement & Education</a></li>
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Communication">Public Engagement & Education</a></li>
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Human_Practices">Integrated Human Practices</a></li>
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                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/BreastCancerInChina">GreatBay_SCIE X Pink Ribbon</a></li>
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Collaborations">Collaborations</a></li>
 
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Collaborations">Collaborations</a></li>
                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/SMS">Partnership with SMS_Shenzhen</a></li>
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                 <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Partnership">Partnership with SMS_Shenzhen</a></li>
 
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        <!--<li>
 
            <a href="https://2021.igem.org/Team:GreatBay_SCIE/Notebook">Notebook</a>
 
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                <li><a href="https://2021.igem.org/Team:GreatBay_SCIE/Methods">Methods</a></li>
 
  
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   <ul>
 
   <ul>
 
         <li class="top1">  
 
         <li class="top1">  
             <a href = "#sec1" id = "nav1">Project description</a>
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             <a href = "#Background">Background</a>
 +
          <ul>
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            <a href = "#China""nav2">Breast Cancer in China</a>
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          </ul> 
 
         </li>       
 
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         <li>  
             <a href = "#sec2" id = "nav2">Background</a>
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             <a href = "#Current">Current Treatments</a>
        </li>  
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        <li>  
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            <a href = "#Surgery">Surgery</a>
             <a href = "#sec3" id = "nav3">Breast cancer in China</a>
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          </ul>
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            <a href = "#Radio""nav2">Radiotherapy</a>
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          </ul>  
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<ul>  
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             <a href = "#Chemo""nav2">Chemotherapy</a>
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          </ul>
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            <a href = "#Target""nav2">Targeting Drugs</a>
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          </li>  
 
         </li>  
 
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         <li>  
             <a href = "#sec4" id = "nav4">Poverty-limited treatment</a>
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             <a href = "#Our">Our Project: Oncokiller</a>
        </li>
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        <li>
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            <a href = "#sec5" id = "nav5">Current Drugs</a>
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        <li>
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            <a href = "#sec6" id = "nav6">Oncokiller</a>
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         <li>  
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         <li class="btm1">  
             <a href = "#sec7" id = "nav7">Looking into the future</a>
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             <a href = "#Refe">Reference</a>
 
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<p class="title" style="font-size:500% !important; text-align:center;">Description</p >
  
<h1 id="sec1">Project: Description</h1>
+
<h1 id='Background'>Background</h1>
 +
<p>Breast Cancer is one of the most prominent cancers presented in females. In 2020, 24.5% of the cancer cases diagnosed in women were breast cancer, the largest among the 36 cancers. It also accounts for 15.5% of all deaths caused by cancer in women.</p>
 +
<p>Breast cancer is a type of cancer caused by the uncontrolled proliferation of breast tissue due to genetic mutations, which will result in the presence of a tumor. It usually starts in the mammary glands or the lactiferous ducts. Five stages, from stage 0 to stage lV, in which the severity of disease and difficulty of treatment increase at each stage, are used to divide the breast cancer. In the later stages, breast cancer becomes invasive. The phenomenon is known as metastasis, meaning that cancer cells can spread to other tissues or organs, significantly increasing the hardness of curing. Early symptoms of breast cancer are not obvious, and many patients often ignore the presence of a painless lump<sup>[1]</sup>. </p>
  
<h2 id="sec2">Inspiration</h2>
+
<h2 id='China'>Breast Cancer in China</h2>
 +
<p>Breast cancer is a particularly grave issue in China. Due to lack of awareness among young people and the difficulties in detecting, 84.3% of the patients are diagnosed at late stages, thus being difficult to cure <sup>[7]</sup>. </p>
 +
<p>The fast-pace-lifestyle in China&#39;s megacity has also caused breast cancer to arise in younger ages. In big cities like Shenzhen, young people face a lot of pressure and work long hours, and thus miss out on regular checkups in hospital. As a result, they have a higher chance of getting breast cancer. Breast Cancer is also less aware by the general public. Therefore, most women pay little attention to the health condition of their breast, neglecting critical signs of early-stage breast cancer, thus making it harder to cure upon late diagnosis.</p>
 +
<p>
 +
<center>
 +
<img src="https://static.igem.org/mediawiki/2021/c/c2/T--GreatBay_SCIE--Description_F1.jpg" width="80%">
 +
<div class="image_text"><strong>Figure 1<sup>[7]</sup> Age distribution of patients with breast cancer.</strong> Figure 1 shows age distribution in China and the USA in 2008, and estimates the distributions in China in 2020 and 2030; based on data from the WHO China country profile.22. Breast Cancer patients in China are much younger.</div>
 +
</center>
 +
</p>
  
<h3 id="sec3">Background</h3>
+
<h1 id="Current">Current Treatments</h1>
<p> Breast cancer(BC) is the disease caused by uncontrolled proliferation of breast tissue due to genetic mutations, which will result in the presence of tumor. It usually starts in milk glands or the ducts connecting them to the nipple. Five stages, from stage 0 to stage lV, in which the severity of disease and difficulty of treatment increase at each stage, are used to divide the breast cancer. In the later stages, breast cancer becomes invasive, meaning that it can spread to other tissues or organs, significantly increasing the hardness of curing. For example, in stage lV, the cancer has spread to other organs, namely metastasis. The survival rate is only one-third of the early stage. Unluckily, the early symptoms of BC are not obvious, mostly the presence of a painless lump, which makes the problem even worse[14].</p>
+
<p>Traditional treatment approaches for breast cancer include surgery, chemotherapy, and radiotherapy. Not only do these methods try to eradicate tumors, but they also aim to maintain the overall health condition of patients. However, conventional treatments are severely challenged by issues such as side effects and cost<sup>[2]</sup>.</p>
<p> Breast Cancer is one of the most prominent cancers present in females. In 2020, 11.7% of the newly diagnosed cancer cases are breast cancers, largest among the 36 cancer. Among women, 24.5% of the cancer cases were breast cancer, and 15.5% of death is caused by breast cancer as well. 1 in 8 women will be diagnosed with invasive breast cancer and 1 in 39 of women die from it. In USA, 2019, over forty thousand people died from BC, and the total case exceeded 300,000. </p>
+
<br>
+
<h4 id="sec4">Breast cancer in China</h4>
+
<p> Breast cancer in China is a particularly grave issue. Due to lack of awareness among young people and the difficulties in detecting, 84.3% of the patients are diagnosed at late stages, thus being difficult to cure.</p>
+
<div class="image_text"> <Strong>Fig. 4 <sup>[7]</sup> Age distribution of patients with breast cancer</Strong> <i> Figure shows age distribution in China and the USA in 2008, and estimated distributions in China in 2020 and 2030; based on data from the WHO China country profile.22</i>
+
  
<p> The fast-pace-lifestyle in China's mega city have also caused breast cancer to arise in younger ages. In big cities like Shenzhen, young people face a lot of pressure and work long hours; as a result, they not only have higher chances of getting breast cancer, but also miss out on regular check ups in hospitals. </p>
+
<h2 id="Surgery">Surgery: <em>Mastectomy</em> and <em>Lumpectomy</em></h2>
 +
<p>Surgeries can cure stage l breast cancer. <em>Mastectomy</em> is the main surgical means for curing breast cancer. It involves the removal of the breast and some chest muscles, and in some cases, also lymph nodes. However, it is not effective enough for late-stage cancers, as tumor recurrence often occurs after surgeries. In later stages of breast cancer, surgery is followed by radiotherapy and chemotherapy. </p>
 +
<p>Due to the nature of mastectomy, many women choose not to remove their breasts for various reasons, such as appearance issues. In these cases, they choose <em>lumpectomy</em>, which is breast-conserving surgery. However, this type of surgery requires hospitals with advanced equipment and well-experienced surgeons.</p>
  
<p> The reason why we notice the issue of breast cancer is that a lot of friends and family members have suffered from it. For example, Jerry (one of our team memebrs)’s grandmother got breast cancer several years ago. We want to do something for them by participating in breast cancer treatment.</p>
+
<h2 id="Radio">Radiotherapy</h2>
 +
<p>Radiotherapy involves delivering powerful waves of energy to disrupt the tumor cell division, which results in the shrinkage or eradication of tumors during the early stages. However, although radiotherapy is a local treatment that only affects the area of the tumor location, side effects such as the swelling of the breast, pain, hair loss, and skin reactions, can occur due to the damages caused on the neighboring healthy tissues due to its weak specificity<sup>[2]</sup>. </p>
  
 +
<h2 id="Chemo">Chemotherapy </h2>
 +
<p>The goal of chemotherapy is to use cytotoxic chemotherapeutic drugs either without or after surgery to interfere with tumor cell division and growth. An example is Paraplatin, a platinum-based chemotherapeutic drug for breast cancer. It functions by forming platinum complexes that can modify DNA structures and inhibit DNA synthesis inside the tumor cells<sup>[11]</sup>. However, the long-term adverse effects of chemotherapy on the patients’ healthy organs have been increasingly concerned due to the lack of specificity against the tumor region. In addition to cancer cells, these drugs affect other rapidly dividing cells (e.g., hair, gastrointestinal epithelium, bone marrow)<sup>[3]</sup>. Furthermore, multidrug resistance is also a challenging issue caused by the over-expression of certain proteins in the tumor cells; the effect of chemotherapy is often drastically reduced in this case<sup>[2]</sup></p>
 +
<div class="highlights">
 +
<h3>Weaknesses of Current Treatments </h3>
 +
<p>The average cost using traditional treatments for the five stages of breast cancer is shown in Table 1.</p>
 +
<center>
 +
<div class="image_text"><strong>Table 1<sup>[10]</sup> Cost of breast cancer at different stages</strong></div>
 +
<table border="1">
 +
  <tr>
 +
    <th>Stages of Breast Cancer</th>
 +
    <th>Cost of Treatment</th>
 +
  </tr>
 +
  <tr>
 +
    <td>Stage 0</td>
 +
    <td> $48,477, on average, 6 months after diagnosis. The total rose to $71,909 after 2 years. </td>
 +
  </tr>
 +
  <tr>
 +
    <td>Stage I</td>
 +
    <td>$61,621-$97,066</td>
 +
  </tr>
 +
  <tr>
 +
    <td>Stage II and III</td>
 +
    <td>$84,481-$159,442</td>
 +
  </tr>
 +
  <tr>
 +
    <td>Stage IV</td>
 +
    <td>$89,463-$182,655</td>
 +
  </tr>
 +
</table>
 +
</center>
 +
<p>  In China, over 80% of patients are diagnosed in stage ll, lll, or lV. In fact, the cost of traditional breast cancer therapy is unaffordable for a number of families. </p>
 +
<p>  Moreover, due to the lack of specificity of current treatments, such as chemotherapy, the side effects are extremely severe, resulting in health issues and therapeutic inefficiency. The number of some normal somatic cells, such as the white blood cell, is dramatically reduced during the course of treatment along with several short-term or long-term adverse effects. </p>
 +
</div>
 +
 +
<center>
 +
<img src="https://static.igem.org/mediawiki/2021/c/c3/T--GreatBay_SCIE--Description_Symptoms.png" width="70%" style="border-radius:10px;">
 +
<div class="image_text">
 +
Figure 2 Acneiform rash on (A) the face and (B) back of patients treated with cetuximab (erbitux), a monoclonal antibody targeting epidermal growth factor receptor.<sup>[3]</sup>
 +
</div>
 +
</center>
 
<br>
 
<br>
<h3 id="sec3">Current Issue——mainstream treatments</h3>
 
<p>Traditional treatment approaches for breast cancer, and most other cancers, include surgery, chemotherapy, and radiotherapy[1]. Not only do people want to eradicate tumors via these methods, but they also aim to maintain the overall health condition of patients[1]. However, these conventional treatments are severely challenged by issues such as side effect, tumor recurrence and drug resistance[1].
 
</p>
 
 
<br>
 
<br>
<h4 id="sec4">Surgery</h4>
+
<h1 id='Target'>Targeted therapy </h1>
<p>Stage l breast cancer can be cured with surgical operational surgeries involves the removal of breast and lymph nodes, in some cases, some chest muscles have to be removed as well. However, it is not effective in case of tumor recurrence and metastases to distant organs including bone, lung and liver[1]. Also many women might not want to remove their breast, for various reasons.
+
<p>   Targeted therapy is one of the more successful solutions that has been developed so far. Briefly, a targeted drug only kills cells on which a specific target presents. For example, if the target is on a breast cancer cell, the drug will only kill that cell. This mechanism effectively prevents normal cells from being killed<sup>[4]</sup>. In comparison with chemotherapeutic drugs, targeted drugs block the proliferation of cancer cells via binding to specific molecules required for tumor development and growth rather than molecules presenting in normal tissues. The specificity of targeted drugs can significantly reduce the side effects of cancer treatments and thus improve drugs' therapeutic efficacy<sup>[4]</sup>.</p>
 +
<p>  In the past decade, a dramatic shift in the cancer-treating field from conventional treatments to targeted drugs has occurred. In comparison with a number of three chemotherapeutic drugs being approved by the FDA, fifteen targeted drugs have been approved<sup>[3]</sup>.</p>
 +
<p>  The type of targeted drug most widely applied is a monoclonal antibody(mAB). Only in 2015-2021, the FDA proved over fifty kinds of different mAB<sup>[8]</sup>. The conventional mAB drug involves an engineered antibody that binds to a specific receptor and kills the cancer cell in diverse ways. For example, the popular antibody-drug &#39;Herceptin&#39; (Trastuzumab) was invented in the 90s. It binds to HER2 receptors specifically and competitively inhibits the binding of growth factors to the receptors, thus killing the cell. Moreover, an antibody-drug conjugate(ADC), an upgrade for traditional antibody drugs, functions by carrying a lethal material, such as toxins or radioisotopes, to the targeted cells<sup>[14]</sup>. </p>
 +
<p>  Attracted by the trending popularity of targeted therapy, our goal is to engineer a new variation of targeting drugs to play a part in curing cancer. </p>
 +
 
 +
<p>
 +
<center>
 +
<img src="https://static.igem.org/mediawiki/2021/3/3a/T--GreatBay_SCIE--ADC.png" width="60%" style ="border-radius: 10px;">
 +
<div class="image_text"><strong>Figure 3 Brief diagram of antibody-drug conjugate(ADC)[11]</strong><div>
 +
</center>
 
</p>
 
</p>
<br>
 
<h4 id="sec4">Radiotherapy </h4>
 
<p>Radiotherapy involves delivering powerful waves of energy to disrupt the tumor cell division, which results in the shrinkage or eradication of tumors, during the early stages. However, although radiation therapy is a local treatment that only affects the area of the tumor location, side effects can occur due to the damages caused on the neighboring healthy tissues due to its weak specificity[1].
 
</p>
 
<br>
 
<h4 id="sec4">Chemotherapy </h4>
 
<p>The goal of chemotherapy is to use cytotoxic chemotherapeutic drugs either after or without surgery to interfere with tumor cell division and growth[1]. An example is kinase inhibitors, a chemical drug that inhibits tyrosine kinase at the end of the signaling pathway to kill cells that over-expresses HER2. However, the long-term adverse effects of chemotherapy on the patients’ healthy organs, due to the lack of specificity, have been increasingly concerned[1]. In addition to cancer cells, other rapidly dividing cells (e.g., hair, gastrointestinal epithelium, bone marrow) are affected by these drugs[3]. Furthermore, multi-drug resistance is also a challenging issue caused by over-expression of certain proteins in the tumor cells. The effect of chemotherapy is often drastically reduced in this case[1].
 
</p>
 
<br>
 
<h4 id="sec4">Conclusion</h4>
 
<p>It is obvious that there is a urgent demand for better types of cancer treatments, for their intolerable side effects. The goal of our team is to design a new drug deliver system——more specific, cheaper, practical.
 
</p>
 
<br>
 
<h3 id="sec3">Targeted therapy</h3>
 
<p>Targeted therapy is one of the successful solutions that has developed so far. Briefly, targeted drugs are to release drugs to specific areas only by targeting a specific molecular target, thus preventing normal cells being killed via maintaining appropriate drug concentration in the other body areas[4]. In comparison with chemotherapeutic drugs, targeted drugs blocks the proliferation of cancer cells via binding to specific molecules required for tumor development and growth rather than molecules presenting in normal tissues. The specificity of targeted drug can significantly reduce the side effects of cancer treatments and thus improves the therapeutic efficacy of drugs[4].
 
In the past decade, a dramatic shift in cancer treating field, from conventional treatments to targeted drugs, has occurred[3]. In comparison with a number of three chemotherapeutic drugs being approved by FDA, fifteen targeted drugs have been approved[3].
 
Attracted by the trending popularity of targeted therapy, our goal is to utilize this technology and engineer a new type of targeting drug to play a part in curing cancer.
 
But what type of targeted drug we are looking for?
 
Two main types of targeted drugs are monoclonal antibody and small molecule inhibitor.
 
<p>1. (这两个并列段字体不需要变小,我不知道为啥变小了)Monoclonal antibody: engineered antibody binds to a specific receptor and kill the cancer cell via diverse ways. For example, the first ever antibody drug 'Herceptin' (Trastuzumab) was invented in the 90s, it binds to HER2 receptors and prevent growth factors to bind, thus killing the cell. In addition, scientists modifies the Fc domain of the antibody to increase its effect. Moreover, antibody-drug conjugate(ADC) an upgrade for traditional antibody drugs, functions by carrying a lethal payload, such as toxin or radioisotope, to the targeted cells[3].
 
2. Small molecule inhibitor: small molecule inhibitors function by ceasing the proliferation of cancer cells by interfering with intracellular signaling of tyrosine kinases, and finally stoping cell growth, proliferation, migration, or angiogenesis. EGFR, HER2, VEGF receptors are all tyrosine kinases. Small molecule inhibitor has several merits in comparison to monoclonal antibody, such as they are chemically manufactured, which is less expensive. However, they achieve less specific targeting than do monoclonal antibodies[3]. 
 
</p>
 
<br>
 
<h4>Issues with the two popular types of targeted drugs</h4>
 
<p>By communicating with some drug producing firms (See more in IHP(超链接)) and doing more researches online, we have known that there may be some difficulties with the current targeted drugs. For monoclonal antibodies, the cost is way too high for most patients due to the sophisticated antibody production method[3]. For example, multi-drug colorectal cancer treatment regimens containing Bevacizumab or Cetuximab cost up to $30,790 for eight weeks of treatment, compared with $63 for an eight-week regimen of Fluorouracil (Adrucil) and Leucovorin, the standard treatment until the mid-1990s[3]. For small molecule inhibitors, the weaker specificity and stability—most small molecule inhibitors have half-lives of only hours and require daily dosing—limits their applications[3].
 
Therefore, it is obvious that the current therapy is not satisfied and there is a need for developing a new type of targeted drug, which can solve these problems.
 
</p>
 
<br>
 
<h4 id="sec4">Conclusion</h4>
 
<p>We plan to develop a new kind of targeted drug which can combine the advantages of the monoclonal antibody and small molecule inhibitor, while avoiding their disadvantages. The drug should be more stable, more specific, more versatile, and cost less
 
</p>
 
<br>
 
<h2 id="sec2">Our project—Oncokiller(more in Design(超链接))</h2>
 
</p>
 
<br>
 
<h3 id="sec3">Overview</h3>
 
<p>After long researching, we encountered aptamer.
 
Our project aims at utilizing aptamers to develop a new type of targeted drug. In this project, we use HER2 aptamer, which will only target the breast cancer, but we believe that the system can also be used to kill other cancers by applying different aptamers.
 
Compared to the traditional antibody-based targeted drugs whose specificity were provided by the antibody, our project uses aptamers as guide molecules, combining providing us with advantages such as lower production costs and shorter production period.
 
Compared to the traditional targeted therapy, which applies antibodies and small molecule inhibitors, we use aptamers as guide molecules. Also, nanoparticles are used to encapsulate our drug. This design provides our drug with improvement in stability and specificity, also lower price.
 
(图)
 
Our drug deliver system consists of three parts: aptamer, nanoparticle, and drug.
 
</p>
 
<br>
 
<h3 id="sec3">Aptamer: specificity & cost</h3>
 
<p>Aptamers, nucleic acid ligands generated using SELEX(more in design), are one of only a few classes of molecules that, like antibodies, can be crafted to bind to multiple different targets. For example, Pegaptanib, the first aptamer-based drug approved by FDA in 2004 for curing the loss of visual acuity, applies VEGF-specific aptamers. Our aptamer can specifically bind to HER2 receptors(more in design), leading the drug to the right place and killing the breast cancer cells.
 
<h3 id="sec3">Nanoparticles: stability</h3>
 
<p>Nanoparticles are used to cover our drug and thus increase the stability of the whole system, otherwise the drug might easy be eliminated form the blood before reaching tumors. The two nanoparticles we will use are PLGA and liposome; we will choose the better one based on the experiment results.
 
<h3 id="sec3">Drug: our killer</h3>
 
<p>Doxorubicin, a chemotherapeutic agent with strong activity against a wide range of human malignant neoplasms including acute leukemia, non-Hodgkin lymphomas, breast cancer, Hodgkin's disease and sarcomas, is the drug we apply. Originally, Doxorubicin is isolated from the fungus Streptomyces peucetius. It has been in use as a key anticancer drug for forty years and is thus well-researched[3].
 
  
</p>By combing the three structures, we have developed a drug deliver system applying aptamer rather than antibody; aptamers for navigating; nanoparticles for protecting; drug for killing. However, we are not satisfied. To further improve the specificity and stability of the system, allowing it to compete with current antibody-based drugs and small molecule inhibitors, we plan to do modifications throughout our system.
+
<div class="highlights">
1. Specificity: we have introduced one of the newest technologies, pH-sensitive motif, for increasing aptamer specificity
+
<h3>Issues with Monoclonal Antibody Drug</h3>
2. Stability: both aptamers and the nanoparticles are attached by chemicals such as PEG and CS( more in Design )
+
<p>   By communicating with some drug-producing firms (See more in <a href="./Human_Practices" target="_blank" class="bton">IHP</a>) and doing more research online, we have known that there are issues with mAB, the currently most popular targeted drug. </p>
<h3 id="sec3">A collection of advantages of our system(图—暂时没有还不用放)</h3>
+
 
 +
<p>The cost is unaffordable for most patients due to the sophisticated antibody production method For example, multidrug colorectal cancer treatment regimens containing bevacizumab or cetuximab cost up to $30,790 for eight weeks of treatment, compared with $63 for an eight-week regimen of fluorouracil (Adrucil) and leucovorin, the standard treatment until the mid-1990s<sup>[3]</sup>.</p>
 +
<p>Moreover, although monoclonal antibody therapy is a relatively mature technique for curing cancers, the patients still exhibit strong side effects. Scientists are still endeavoring to develop better drugs by improving their stability and specificity.</p>
 +
</div>
 +
<h1 id='Our'>Our Project—Oncokiller</h1>
 +
<p>  As mentioned above, several aspects can be improved, mainly the cost of production, stability, and specificity.</p>
 +
<p>  We have engineered a new breast cancer drug by adopting recent technologies and materials such as Aptamer, pH-sensitive DNA switches, Nanoparticles, and Surface coating. We hope that our system can provide a new possibility for breast cancer treatment and thus allow more patients to be able to afford an effective treatment.</p>
 +
 
 
<p>
 
<p>
 +
<center>
 +
<img src="https://static.igem.org/mediawiki/2021/2/27/T--GreatBay_SCIE--Design_Simple.png" width="80%" style ="border-radius: 10px;">
 +
<div class="image_text"><em>A simple sketch of our design.</em><div>
 +
</center>
 
</p>
 
</p>
<br>
+
 
<h2 id="sec2">Future plan</h2>
+
<p>See more in our <a href="./Design" class="bton">Design Page</a></p>
<p>Although ONCOKILLER seems prosperous. We have countered several issues during our time in the lab, which you can read about in our Results page.
+
<h1 id='Refe'>Reference</h1>
However, there is more to it than this. If ONCOKiller can be refined and optimized it could become a universal model for many cancer drugs. Due to the accessibility of aptamers and its versatility, drugs for diverse cancers can be produced using the our system, but with different aptamers. For example, targeted drug for liver cancer can apply aptamers specifically binding to liver cancer cells instead of HER2 aptamers. We believe that more cancer curing drugs can be made cheaper, allowing more families to be able to afford them.
+
In the past few months, we've read through literature performed experiments; we overcame many difficulties, tried out different solutions and eventually led to our preliminary design for our project.
+
Fighting cancer is hard. We know our targeting drug have many issues yet to be solved, but we wish to do our bit in this long-stretched fight.
+
</p>
+
<br>
+
<h2 id="sec2">Reference</h2>
+
 
<ol>
 
<ol>
 +
<li><em>Breast Cancer Facts &amp; Figures | American Cancer Society</em>. (2019). American Cancer Society. <a href='https://www.cancer.org/research/cancer-facts-statistics/breast-cancer-facts-figures.html' target='_blank' class='url'>https://www.cancer.org/research/cancer-facts-statistics/breast-cancer-facts-figures.html</a></li>
 
<li>Liyanage PY, Hettiarachchi SD, Zhou Y, Ouhtit A, Seven ES, Oztan CY, Celik E, Leblanc RM. Nanoparticle-mediated targeted drug delivery for breast cancer treatment. Biochim Biophys Acta Rev Cancer. 2019 Apr;1871(2):419-433</li>
 
<li>Liyanage PY, Hettiarachchi SD, Zhou Y, Ouhtit A, Seven ES, Oztan CY, Celik E, Leblanc RM. Nanoparticle-mediated targeted drug delivery for breast cancer treatment. Biochim Biophys Acta Rev Cancer. 2019 Apr;1871(2):419-433</li>
<li>M. Zeglinski, Ludke, A., Jassal, D. S., Singal, P. K., Trastuzumab-induced cardiac dysfunction: A 'dualhit'. Exp. Clin. Cardiol. 16 (2011) 70-74</li>
+
<li>Gerber DE. Targeted therapies: a new generation of cancer treatments. Am Fam Physician. 2008 Feb 1;77(3):311-9. PMID: 18297955.</li>
<li>Gerber DE. Targeted therapies: a new generation of cancer treatments. Am Fam Physician. 2008 Feb 1;77(3):311-9. PMID: 18297955</li>
+
<li>Rani, K. (2014). A Review on Targeted Drug Delivery: Its Entire Focus on Advanced Therapeutics and Diagnostics. <em>Scholars Journal of Applied Medical Sciences</em>, <em>2(1C)</em>, 328–331. <a href='https://www.researchgate.net/publication/265862863_A_Review_on_Targeted_Drug_Delivery_Its_Entire_Focus_on_Advanced_Therapeutics_and_Diagnostics' target='_blank' class='url'>https://www.researchgate.net/publication/265862863_A_Review_on_Targeted_Drug_Delivery_Its_Entire_Focus_on_Advanced_Therapeutics_and_Diagnostics</a></li>
<li>A Review on Targeted Drug Delivery: its Entire Focus on Advanced</li>
+
<li>Fan, L., Strasser-Weippl, K., Li, J. J., St Louis, J., Finkelstein, D. M., Yu, K. D., Chen, W. Q., Shao, Z. M., &amp; Goss, P. E. (2014). Breast cancer in China. The Lancet. Oncology, 15(7), e279–e289. <a href='https://doi.org/10.1016/S1470-2045(13)70567-9' target='_blank' class='url'>https://doi.org/10.1016/S1470-2045(13)70567-9</a></li>
<li>https://www.healthline.com/health/transgender/top-surgery</li>
+
<li>https://www.healio.com/news/hematology-oncology/20170314/shorter-radiation-could-safely-lower-costs-of-breast-cancer-treatment</li>
+
<li>Fan, L., Strasser-Weippl, K., Li, J. J., St Louis, J., Finkelstein, D. M., Yu, K. D., Chen, W. Q., Shao, Z. M., & Goss, P. E. (2014). Breast cancer in China. The Lancet. Oncology, 15(7), e279–e289. https://doi.org/10.1016/S1470-2045(13)70567-9</li>
+
<li>Imai, K., Takaoka, A. Comparing antibody and small-molecule therapies for cancer. Nat Rev Cancer 6, 714–727 (2006). https://doi.org/10.1038/nrc1913</li>
+
<li>Eun Seong Lee, Zhonggao Gao, You Han Bae,Recent progress in tumor pH targeting nanotechnology,Journal of Controlled Release,Volume 132, Issue 3, 2008, Pages 164-170, ISSN 0168-3659, https://doi.org/10.1016/j.jconrel.2008.05.003</li>
+
<li>Shaheen Sultana, Mohd Rashid Khan, Mukesh Kumar, Sokindra Kumar & Mohammed Ali (2013)Nanoparticles-mediated drug delivery approaches for cancer targeting: a review, Journal of Drug Targeting,21:2, 107-125, DOI: 10.3109/1061186X.2012.712130</li>
+
 
<li>Targeted delivery of cisplatin to prostate cancer cells by aptamer functionalized Pt(IV) prodrug-PLGA–PEG nanoparticles</li>
 
<li>Targeted delivery of cisplatin to prostate cancer cells by aptamer functionalized Pt(IV) prodrug-PLGA–PEG nanoparticles</li>
<li>]https://www.news-medical.net/health/Carboplatin-Pharmacology.aspx</li>
+
<li>Mandal, A., MD. (2019, February 26). <em>Carboplatin Pharmacology</em>. News-Medical.Net. <a href='https://www.news-medical.net/health/Carboplatin-Pharmacology.aspx' target='_blank' class='url'>https://www.news-medical.net/health/Carboplatin-Pharmacology.aspx</a></li>
<li>https://www.nature.com/articles/d41573-021-00079-
+
<li>Mullard, A. (2021). FDA approves 100th monoclonal antibody product. <em>Nature Reviews Drug Discovery</em>. Published. <a href='https://doi.org/10.1038/d41573-021-00079-7' target='_blank' class='url'>https://doi.org/10.1038/d41573-021-00079-7</a></li>
<li>https://www.cancer.org/content/dam/cancer-org/research/cancer-facts-and-statistics/breast-cancer-facts-and-figures/breast-cancer-facts-and-figures-2019-2020.pdf</li>
+
<li>M. Zeglinski, Ludke, A., Jassal, D. S., Singal, P. K., Trastuzumab-induced cardiac dysfunction: A &#39;dualhit&#39;. Exp. Clin. Cardiol. 16 (2011) 70-74</li>
 +
<li><em>The Costs of Breast Cancer</em>. (2021, February 1). WebMD. <a href='https://www.webmd.com/breast-cancer/breast-cancer-costs' target='_blank' class='url'>https://www.webmd.com/breast-cancer/breast-cancer-costs</a></li>
 +
<li>Bourré, L., PhD. (2021). Expanding the Horizon of Antibody-Drug Conjugates for Cancer Treatment. CrownBio. <a href='https://blog.crownbio.com/antibody-drug-conjugates-for-cancer-treatment#_' target='_blank' class='url'>https://blog.crownbio.com/antibody-drug-conjugates-for-cancer-treatment#_</a></li>
 +
 
 +
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Latest revision as of 17:15, 21 October 2021

Description

Background

Breast Cancer is one of the most prominent cancers presented in females. In 2020, 24.5% of the cancer cases diagnosed in women were breast cancer, the largest among the 36 cancers. It also accounts for 15.5% of all deaths caused by cancer in women.

Breast cancer is a type of cancer caused by the uncontrolled proliferation of breast tissue due to genetic mutations, which will result in the presence of a tumor. It usually starts in the mammary glands or the lactiferous ducts. Five stages, from stage 0 to stage lV, in which the severity of disease and difficulty of treatment increase at each stage, are used to divide the breast cancer. In the later stages, breast cancer becomes invasive. The phenomenon is known as metastasis, meaning that cancer cells can spread to other tissues or organs, significantly increasing the hardness of curing. Early symptoms of breast cancer are not obvious, and many patients often ignore the presence of a painless lump[1].

Breast Cancer in China

Breast cancer is a particularly grave issue in China. Due to lack of awareness among young people and the difficulties in detecting, 84.3% of the patients are diagnosed at late stages, thus being difficult to cure [7].

The fast-pace-lifestyle in China's megacity has also caused breast cancer to arise in younger ages. In big cities like Shenzhen, young people face a lot of pressure and work long hours, and thus miss out on regular checkups in hospital. As a result, they have a higher chance of getting breast cancer. Breast Cancer is also less aware by the general public. Therefore, most women pay little attention to the health condition of their breast, neglecting critical signs of early-stage breast cancer, thus making it harder to cure upon late diagnosis.

Figure 1[7] Age distribution of patients with breast cancer. Figure 1 shows age distribution in China and the USA in 2008, and estimates the distributions in China in 2020 and 2030; based on data from the WHO China country profile.22. Breast Cancer patients in China are much younger.

Current Treatments

Traditional treatment approaches for breast cancer include surgery, chemotherapy, and radiotherapy. Not only do these methods try to eradicate tumors, but they also aim to maintain the overall health condition of patients. However, conventional treatments are severely challenged by issues such as side effects and cost[2].

Surgery: Mastectomy and Lumpectomy

Surgeries can cure stage l breast cancer. Mastectomy is the main surgical means for curing breast cancer. It involves the removal of the breast and some chest muscles, and in some cases, also lymph nodes. However, it is not effective enough for late-stage cancers, as tumor recurrence often occurs after surgeries. In later stages of breast cancer, surgery is followed by radiotherapy and chemotherapy.

Due to the nature of mastectomy, many women choose not to remove their breasts for various reasons, such as appearance issues. In these cases, they choose lumpectomy, which is breast-conserving surgery. However, this type of surgery requires hospitals with advanced equipment and well-experienced surgeons.

Radiotherapy

Radiotherapy involves delivering powerful waves of energy to disrupt the tumor cell division, which results in the shrinkage or eradication of tumors during the early stages. However, although radiotherapy is a local treatment that only affects the area of the tumor location, side effects such as the swelling of the breast, pain, hair loss, and skin reactions, can occur due to the damages caused on the neighboring healthy tissues due to its weak specificity[2].

Chemotherapy

The goal of chemotherapy is to use cytotoxic chemotherapeutic drugs either without or after surgery to interfere with tumor cell division and growth. An example is Paraplatin, a platinum-based chemotherapeutic drug for breast cancer. It functions by forming platinum complexes that can modify DNA structures and inhibit DNA synthesis inside the tumor cells[11]. However, the long-term adverse effects of chemotherapy on the patients’ healthy organs have been increasingly concerned due to the lack of specificity against the tumor region. In addition to cancer cells, these drugs affect other rapidly dividing cells (e.g., hair, gastrointestinal epithelium, bone marrow)[3]. Furthermore, multidrug resistance is also a challenging issue caused by the over-expression of certain proteins in the tumor cells; the effect of chemotherapy is often drastically reduced in this case[2]

Weaknesses of Current Treatments

The average cost using traditional treatments for the five stages of breast cancer is shown in Table 1.

Table 1[10] Cost of breast cancer at different stages
Stages of Breast Cancer Cost of Treatment
Stage 0 $48,477, on average, 6 months after diagnosis. The total rose to $71,909 after 2 years.
Stage I $61,621-$97,066
Stage II and III $84,481-$159,442
Stage IV $89,463-$182,655

In China, over 80% of patients are diagnosed in stage ll, lll, or lV. In fact, the cost of traditional breast cancer therapy is unaffordable for a number of families.

Moreover, due to the lack of specificity of current treatments, such as chemotherapy, the side effects are extremely severe, resulting in health issues and therapeutic inefficiency. The number of some normal somatic cells, such as the white blood cell, is dramatically reduced during the course of treatment along with several short-term or long-term adverse effects.

Figure 2 Acneiform rash on (A) the face and (B) back of patients treated with cetuximab (erbitux), a monoclonal antibody targeting epidermal growth factor receptor.[3]


Targeted therapy

Targeted therapy is one of the more successful solutions that has been developed so far. Briefly, a targeted drug only kills cells on which a specific target presents. For example, if the target is on a breast cancer cell, the drug will only kill that cell. This mechanism effectively prevents normal cells from being killed[4]. In comparison with chemotherapeutic drugs, targeted drugs block the proliferation of cancer cells via binding to specific molecules required for tumor development and growth rather than molecules presenting in normal tissues. The specificity of targeted drugs can significantly reduce the side effects of cancer treatments and thus improve drugs' therapeutic efficacy[4].

In the past decade, a dramatic shift in the cancer-treating field from conventional treatments to targeted drugs has occurred. In comparison with a number of three chemotherapeutic drugs being approved by the FDA, fifteen targeted drugs have been approved[3].

The type of targeted drug most widely applied is a monoclonal antibody(mAB). Only in 2015-2021, the FDA proved over fifty kinds of different mAB[8]. The conventional mAB drug involves an engineered antibody that binds to a specific receptor and kills the cancer cell in diverse ways. For example, the popular antibody-drug 'Herceptin' (Trastuzumab) was invented in the 90s. It binds to HER2 receptors specifically and competitively inhibits the binding of growth factors to the receptors, thus killing the cell. Moreover, an antibody-drug conjugate(ADC), an upgrade for traditional antibody drugs, functions by carrying a lethal material, such as toxins or radioisotopes, to the targeted cells[14].

Attracted by the trending popularity of targeted therapy, our goal is to engineer a new variation of targeting drugs to play a part in curing cancer.

Figure 3 Brief diagram of antibody-drug conjugate(ADC)[11]

Issues with Monoclonal Antibody Drug

By communicating with some drug-producing firms (See more in IHP) and doing more research online, we have known that there are issues with mAB, the currently most popular targeted drug.

The cost is unaffordable for most patients due to the sophisticated antibody production method For example, multidrug colorectal cancer treatment regimens containing bevacizumab or cetuximab cost up to $30,790 for eight weeks of treatment, compared with $63 for an eight-week regimen of fluorouracil (Adrucil) and leucovorin, the standard treatment until the mid-1990s[3].

Moreover, although monoclonal antibody therapy is a relatively mature technique for curing cancers, the patients still exhibit strong side effects. Scientists are still endeavoring to develop better drugs by improving their stability and specificity.

Our Project—Oncokiller

As mentioned above, several aspects can be improved, mainly the cost of production, stability, and specificity.

We have engineered a new breast cancer drug by adopting recent technologies and materials such as Aptamer, pH-sensitive DNA switches, Nanoparticles, and Surface coating. We hope that our system can provide a new possibility for breast cancer treatment and thus allow more patients to be able to afford an effective treatment.

A simple sketch of our design.

See more in our Design Page

Reference

  1. Breast Cancer Facts & Figures | American Cancer Society. (2019). American Cancer Society. https://www.cancer.org/research/cancer-facts-statistics/breast-cancer-facts-figures.html
  2. Liyanage PY, Hettiarachchi SD, Zhou Y, Ouhtit A, Seven ES, Oztan CY, Celik E, Leblanc RM. Nanoparticle-mediated targeted drug delivery for breast cancer treatment. Biochim Biophys Acta Rev Cancer. 2019 Apr;1871(2):419-433
  3. Gerber DE. Targeted therapies: a new generation of cancer treatments. Am Fam Physician. 2008 Feb 1;77(3):311-9. PMID: 18297955.
  4. Rani, K. (2014). A Review on Targeted Drug Delivery: Its Entire Focus on Advanced Therapeutics and Diagnostics. Scholars Journal of Applied Medical Sciences, 2(1C), 328–331. https://www.researchgate.net/publication/265862863_A_Review_on_Targeted_Drug_Delivery_Its_Entire_Focus_on_Advanced_Therapeutics_and_Diagnostics
  5. Fan, L., Strasser-Weippl, K., Li, J. J., St Louis, J., Finkelstein, D. M., Yu, K. D., Chen, W. Q., Shao, Z. M., & Goss, P. E. (2014). Breast cancer in China. The Lancet. Oncology, 15(7), e279–e289. https://doi.org/10.1016/S1470-2045(13)70567-9
  6. Targeted delivery of cisplatin to prostate cancer cells by aptamer functionalized Pt(IV) prodrug-PLGA–PEG nanoparticles
  7. Mandal, A., MD. (2019, February 26). Carboplatin Pharmacology. News-Medical.Net. https://www.news-medical.net/health/Carboplatin-Pharmacology.aspx
  8. Mullard, A. (2021). FDA approves 100th monoclonal antibody product. Nature Reviews Drug Discovery. Published. https://doi.org/10.1038/d41573-021-00079-7
  9. M. Zeglinski, Ludke, A., Jassal, D. S., Singal, P. K., Trastuzumab-induced cardiac dysfunction: A 'dualhit'. Exp. Clin. Cardiol. 16 (2011) 70-74
  10. The Costs of Breast Cancer. (2021, February 1). WebMD. https://www.webmd.com/breast-cancer/breast-cancer-costs
  11. Bourré, L., PhD. (2021). Expanding the Horizon of Antibody-Drug Conjugates for Cancer Treatment. CrownBio. https://blog.crownbio.com/antibody-drug-conjugates-for-cancer-treatment#_