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<title>Sensing – Background – TUDA iGEM 2021</title>
<link rel="canonical" href="./sensing-background" />
53 KB (7,122 words) - 16:29, 20 October 2021
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...ost_type menu-item-object-page menu-item-159"><a href="./sensing">Pathogen Sensing</a></li>
...tadt-blocks-nav-heading"><h2 class="section" id="pathogensensing">Pathogen sensing</h2></div>
64 KB (8,992 words) - 19:12, 20 October 2021
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....This construct is derived from...the inducible promoter of the lux quorum sensing system of Vibrio fischeri ...inducible promoter see...']"},{"machine":"BBa_
1.16 MB (178,107 words) - 18:53, 7 August 2021
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<title>Sensing – Circuit – TUDA iGEM 2021</title>
<link rel="canonical" href="./sensing-circuit" />
44 KB (5,953 words) - 16:29, 20 October 2021
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...ost_type menu-item-object-page menu-item-159"><a href="./
sensing">Pathogen
Sensing</a></li>
...mbled our <strong><a href="#pathogensensing" class="ek-link">pathogen
sensing</a> circuit</strong> using GoldenBraid 2.0 cloning. <strong>Functionality o
54 KB (7,522 words) - 16:29, 20 October 2021
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...i>. Combined with the observed high AHL sensitivity, we showed that quorum sensing might be a good mechanism to base this safety circuit on.
<h3>Quorum sensing</h3>
64 KB (8,444 words) - 16:44, 2 December 2021
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...intestine [1,2]. To proof IBDetection, we characterized the tetrathionate sensing TtrS/R system, reproduced the ultrasound-based ARG1 reporter system, and tr
...<h2 class="text-start fw-bolder tab" style="color: #680505">TtrS/R sensing system</h2>
36 KB (4,623 words) - 14:48, 21 October 2021
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...ost_type menu-item-object-page menu-item-159"><a href="./sensing">Pathogen Sensing</a></li>
...our kill-switch.</span></strong> The kill-switch is based on a ComX quorum sensing system. 1) If the cell stays in the biofilm, the ComX concentration is high
99 KB (13,795 words) - 19:10, 20 October 2021
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...<a class="nav-link" href="#Subtitle2">Oxidative Stress
Sensing</a>
...<a class="nav-link" href="#Subtitle3">Interferon-gamma
Sensing</a>
79 KB (9,984 words) - 21:07, 21 October 2021
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...tural chemotaxis pathway to AI-2 of our ECN. AI-2 is the only known quorum sensing signal secreted by H. pylori and also a chemoattractant signal for E. coli.
This ability also plays a role in the quorum sensing (QS), a cell to cell communication process within the population of bacteri
105 KB (13,494 words) - 20:06, 21 October 2021
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...ost_type menu-item-object-page menu-item-159"><a href="./sensing">Pathogen Sensing</a></li>
...trong> that triggers bacteriophage release upon induction through a quorum sensing (QS) signal. Knowledge of the relationship between the number of QS signali
65 KB (8,850 words) - 16:38, 20 October 2021
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...ost_type menu-item-object-page menu-item-159"><a href="./sensing">Pathogen Sensing</a></li>
...n of <strong>metabolic dependency</strong> and the usage of<strong> quorum sensing </strong>or<strong> surface proteins.</strong> Furthermore, to ensure that
191 KB (25,186 words) - 16:41, 20 October 2021
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...<li><a id="run2" class="scrollID" onclick="scrollToID('run2Section')">Sensing</a></li>
...</b>. Staphylococcus aureus itself is a gram-positive bacteria. Its quorum-sensing unit will be more easily expressed on another gram-positive bacteria than a
55 KB (7,093 words) - 15:56, 17 December 2021
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<li class="mark" id="mark2">The Scheme of Quorum Sensing Model</li>
<li class="mark" id="mark4">Simulation of Quorum Sensing Model</li>
28 KB (2,977 words) - 12:17, 14 September 2021
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...ensing"><span class="toc-number">3.2.</span> <span class="toc-text">Oxygen
sensing</span></a></li><li class="toc-item toc-level-3"><a class="toc-link" href="#
...en
sensing</h5><p>The goal of this function is to monitor wound healing by
sensing changes in the oxygen concentration in the wound.<br/>Generally, it is not
42 KB (5,793 words) - 23:16, 15 December 2021
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<a class="nav-link" href="#Subtitle3">Sensing for Stress Biomarkers</a>
...ve oxygen species (ROS) and IFN-γ through the oxidative stress and IFN-γ sensing systems and produce the taurine production enzymes. Finally, with math-base
28 KB (3,467 words) - 07:18, 8 December 2021
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<a id="zone3-2">Quorum sensing</a>
...e, multivirus detection would be realized. Moreover, with LuxI/LuxR quorum sensing system from <span style="font-style: italic;">E. coli</span> used to improv
18 KB (2,271 words) - 03:11, 22 October 2021
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...a> page. The results for each of the three major characterizations (TtrS/R sensing system, ARG1 reporter system, and the entire sensor) will be discussed in t
...arious experiments, resulting in a full dose-response curve for the TtrS/R sensing system, which detects Ttr and produces sfGFP as output (n=1). Besides, for
31 KB (3,916 words) - 15:09, 21 October 2021
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...e="Abstract"></a>Abstract</h3><p>We built an ODE-based model of the Oxygen
Sensing system to simulate the system’s response to oxygen: some genes are expres
...Aim" title="Aim"></a>Aim</h3><p>This model aims to confirm that our Oxygen
Sensing system will respond to oxygen. Although we can predict that the system can
563 KB (66,273 words) - 06:27, 11 December 2021
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  To incorporate quorum sensing, dental pathogen inhibition, and dental restoration into <i>E. coli</i>, we
</svg>Figure 1. Biobrick design overview. (A)Quorum sensing sequence (B) Inhibition sequence (C) Restoration sequence</div>
39 KB (4,562 words) - 11:37, 12 December 2021
