Modeling
A Continuation of 2020’s aSAP
In the 2020 edition of aSAP, modeling helped us identify and study the theoretical behavior of candidate enzymes. This year, that led to the experimental confirmation and characterization of our chosen enzyme, a dextranase from G. Algens.
This evolution is a great example of how modeling has already helped us bridge the gap between theory and practice within a short time frame, helping solve a problem that would have otherwise taken a long time to solve strictly with wet lab experiments. This modeling paved the way for many of our other scientific achievements this year, such as those described in Syrup Microbiology, Proof of Concept and Engineering Success.
Modeling Background of 2021’s aSAP
In 2021, using modeling in a completely different way this time, we set our sights on
figuring out how aSAP would actually work in a real-world scenario. With our wet lab work
covering biochemistry and microbiology in the scientific sphere of our project, we wanted to
get a better grasp of its practical sphere: actually mixing our enzyme. This model would not
be molecular, as it was in 2020, but rather mechanical.
Maple syrup, defective or not, is stored in barrels that are then placed inside warehouses managed by maple syrup organizations in Quebec, such as the Producteurs et productrices acéricoles du Québec (PPAQ, French for Maple Producers of Quebec).
We didn’t want to change the current processing and management of maple syrup barrels, since the problem only concerns some of the barrels, the ones containing ropy maple syrup. Our first approach to mix our enzyme with ropy maple syrup was to directly insert a mixer inside the barrel. That would not change the processing chain of barrels, rather just add a new step in the chain that would not require extracting the syrup to mix it.
That proved to be difficult because of the small diameter (around 5 cm (Arzate, 2010)) of the hole used to fill barrels with maple syrup. A mechanical mixer strong enough to mix a viscous syrup, such as ropy maple syrup, would hardly fit through such a small opening. Another point is that the hole is not in the center of the barrel’s top, so it would also need to fold to pass through the filling hole, then unfold inside the barrel to rotate at its center to effectively mix the syrup (see Figure 1). This posed a problem for the mechanical capability and effectiveness of the mixer.
However, in discussions with the PPAQ, we discovered that producers and organizations each have their own storing barrels, meaning that maple syrup is transferred from a producer’s barrel to a storing barrel used by said organizations. That sparked the idea to implement a way for our enzymatic treatment to act during the transfer of the syrup between the two barrels, as shown in the picture below. Once again, this would not add a new processing chain, rather just a step in the current processing chain. Having solved the physical implementation step, the next step was to find a mixing process with the help of modeling.
In order to model a realistic mixer, we needed knowledge of the existing mixers, parameters to consider, and modeling possibilities. With some research, we discovered the existence of computational fluid dynamics (hereby referred to as CFD). However, among our student team members, none had prior knowledge of CFD, since no one had been trained in mechanical or chemical engineering. We therefore contacted and partnered up with Hossein, a chemical engineering Ph.D. student who helped us through all modeling steps.
In this work, a numerical scheme using CFD method is developed to analyze multiphase flow,
or the interactions of multiple liquids, within a mixer tank. In this regard, ANSYS
Fluent (ANSYS, 2016)
is used as the modeling tool.
A tank with an integrated mixer is used in our simulations because in a real scenario, ropy syrup would be transferred from the producer’s barrel into a tank, then mixed with our dextranase and finally transferred into another barrel for storing. See Figure 2.
* Parameters mentioned are non-exhaustive and only portray the specific conditions of ropy maple syrup.
For the simulations, we used a ropy syrup viscosity of 1 Pa·s corresponding to the sample #2. That viscosity score is 1000x higher than water. We wanted to test with the highest viscosity to recreate a “worst-case scenario.” However, some ropy maple syrup may be even more viscous than the samples we had access to. We made the assumption it would still represent an accurate simulation of real mixing processes.
We used water to represent the enzyme in the simulations. This assumption is made considering that the presence of the enzyme will not significantly modify the viscosity of its vehicle. The vehicle will also contain other components such as ions and a buffer solution rather than pure water. Again, we assume this will not alter the results significantly considering the high ratio of ropy syrup / water viscosity.
Density of water is considered to be 998.2 kg/m3 according to Ansys Fluent library (ANSYS, 2016). We set maple syrup density at 1333 kg/m3 by converting 67 Brix degrees (°Bx) to density units. The usual sugar concentration for maple syrup is 66°Bx, but syrup of 67°Bx is also made by maple producers and is slightly more viscous. We assumed regular or ropy maple syrup has the same density because producers monitor the boiling process of maple sap to aim for 66°Bx.
Lastly, all simulations were made in a two-dimensional environment due to Ansys Student license limitations and to the lack of computational power (such as a calculation server).
Jet mixers require a continuous flow in order to have an effective mixing process. Since we didn’t want to dilute ropy syrup any more than with the small quantity of the enzyme vehicle required, we had to consider using the syrup inside the tank to create the mixing flow. To test that, we simulated the mixing of ropy syrup with ropy syrup taken from the tank and coming out of the jet nozzle. To compare the mixing effectiveness of the jet mixer using a far less viscous fluid, we simulated water coming out of the jet nozzle. The Simulation 1 indicates that the syrup-water (ambient-injected fluids) combination mixes far better than the syrup-syrup combination. The flow pattern of the first combination shows a rotation of the fluids throughout the tank instead of the push of one fluid by another in the latter. Research also showed that the syrup-water combination is what is expected of jet mixers, but not the syrup-syrup combination (Patwardhan and al., 2003) .
These results made us realize that, in a practical situation, it would be hard to make ropy syrup, a highly viscous fluid, get pushed out of a nozzle through another highly viscous fluid. We couldn’t expect it to mix well enough for a small quantity of water (the enzyme vehicle) to homogenize well throughout the tank. We then turned to a more standard mixing approach in commercial uses: a paddle mixer.
For this type of mixer, we only analyzed a ropy syrup and water (enzyme vehicle) combination because of the ability of paddles to mix without being affected by the viscosity, unlike the jet mixer. However, we studied two types of paddles to determine which one would be best.
Simulation 2 shows the two types of paddles studied. In these simulations, it is important to know that the blue color not only represents the enzyme but its trajectory. When solid blue, this means that the enzyme has made contact with ropy syrup and is actively reacting. Red shows that the enzyme has not yet made contact with ropy syrup. Knowing so, it is easy to see higher turbulence with the cubic paddles, meaning better contact between the enzyme and the syrup. The flat paddles produce a smooth mixing, leaving bigger unmixed areas at the end of the simulation compared to cubic paddles.
Therefore, a paddle mixer using cubic paddles would be more efficient than one using flat paddles.
Limits: We are aware of the limitations imposed by a 2D aspect of a rotating impeller. The characteristics of 3D simulations are far more complicated and time-consuming. In the case of a real-world implementation, more accurate simulations will be done. The purpose of these simulations was to test two types of researched and recommended mixer models and propose a more suited model for further study.
As we established, we did not only use computing power to generate our results for the modeling aspect of aSAP 2021. It also involved research, data gathering, substantial learning and a lot of optimization to better represent what our project could offer in terms of CFD simulations.
Our Best Model: Paddle Mixer With Cubic Paddles
Between the models we tested, the paddle mixer with cubic paddles was the most appropriate model to mix our enzyme with ropy maple syrup. After doing these modeling experiments, we now have a much more solid idea of how aSAP can be implemented, a net improvement to this year’s project.
Our goal: find a way to homogenize our enzyme
with ropy maple syrup.
The Logistics Problem
Maple syrup, defective or not, is stored in barrels that are then placed inside warehouses managed by maple syrup organizations in Quebec, such as the Producteurs et productrices acéricoles du Québec (PPAQ, French for Maple Producers of Quebec).
We didn’t want to change the current processing and management of maple syrup barrels, since the problem only concerns some of the barrels, the ones containing ropy maple syrup. Our first approach to mix our enzyme with ropy maple syrup was to directly insert a mixer inside the barrel. That would not change the processing chain of barrels, rather just add a new step in the chain that would not require extracting the syrup to mix it.
That proved to be difficult because of the small diameter (around 5 cm (Arzate, 2010)) of the hole used to fill barrels with maple syrup. A mechanical mixer strong enough to mix a viscous syrup, such as ropy maple syrup, would hardly fit through such a small opening. Another point is that the hole is not in the center of the barrel’s top, so it would also need to fold to pass through the filling hole, then unfold inside the barrel to rotate at its center to effectively mix the syrup (see Figure 1). This posed a problem for the mechanical capability and effectiveness of the mixer.
However, in discussions with the PPAQ, we discovered that producers and organizations each have their own storing barrels, meaning that maple syrup is transferred from a producer’s barrel to a storing barrel used by said organizations. That sparked the idea to implement a way for our enzymatic treatment to act during the transfer of the syrup between the two barrels, as shown in the picture below. Once again, this would not add a new processing chain, rather just a step in the current processing chain. Having solved the physical implementation step, the next step was to find a mixing process with the help of modeling.
Gathering Knowledge and Data
In order to model a realistic mixer, we needed knowledge of the existing mixers, parameters to consider, and modeling possibilities. With some research, we discovered the existence of computational fluid dynamics (hereby referred to as CFD). However, among our student team members, none had prior knowledge of CFD, since no one had been trained in mechanical or chemical engineering. We therefore contacted and partnered up with Hossein, a chemical engineering Ph.D. student who helped us through all modeling steps.
Computational Fluid Dynamics Simulations
A tank with an integrated mixer is used in our simulations because in a real scenario, ropy syrup would be transferred from the producer’s barrel into a tank, then mixed with our dextranase and finally transferred into another barrel for storing. See Figure 2.
Assumptions and Parameters* to Consider
* Parameters mentioned are non-exhaustive and only portray the specific conditions of ropy maple syrup.
For the simulations, we used a ropy syrup viscosity of 1 Pa·s corresponding to the sample #2. That viscosity score is 1000x higher than water. We wanted to test with the highest viscosity to recreate a “worst-case scenario.” However, some ropy maple syrup may be even more viscous than the samples we had access to. We made the assumption it would still represent an accurate simulation of real mixing processes.
We used water to represent the enzyme in the simulations. This assumption is made considering that the presence of the enzyme will not significantly modify the viscosity of its vehicle. The vehicle will also contain other components such as ions and a buffer solution rather than pure water. Again, we assume this will not alter the results significantly considering the high ratio of ropy syrup / water viscosity.
Density of water is considered to be 998.2 kg/m3 according to Ansys Fluent library (ANSYS, 2016). We set maple syrup density at 1333 kg/m3 by converting 67 Brix degrees (°Bx) to density units. The usual sugar concentration for maple syrup is 66°Bx, but syrup of 67°Bx is also made by maple producers and is slightly more viscous. We assumed regular or ropy maple syrup has the same density because producers monitor the boiling process of maple sap to aim for 66°Bx.
Lastly, all simulations were made in a two-dimensional environment due to Ansys Student license limitations and to the lack of computational power (such as a calculation server).
Mixer Type 1: Jet Mixer
Simulation 1: Comparison of mixing the ropy syrup with ropy syrup (left) and mixing the ropy
syrup with water (right) in a jet mixer. Red is the ambient fluid (ropy syrup in both
cases) and blue is the injection fluid (ropy syrup and water, left and right
respectively). The nozzle is set at the bottom right of the tank and its angle is set at
30°.
Simulation 1: Comparison of mixing the ropy syrup with ropy syrup (top) and mixing the ropy
syrup with water (bottom) in a jet mixer. Red is the ambient fluid (ropy syrup in both
cases) and blue is the injection fluid (ropy syrup and water, top and bottom
respectively). The nozzle is set at the bottom right of the tank and its angle is set at
30°.
Jet mixers require a continuous flow in order to have an effective mixing process. Since we didn’t want to dilute ropy syrup any more than with the small quantity of the enzyme vehicle required, we had to consider using the syrup inside the tank to create the mixing flow. To test that, we simulated the mixing of ropy syrup with ropy syrup taken from the tank and coming out of the jet nozzle. To compare the mixing effectiveness of the jet mixer using a far less viscous fluid, we simulated water coming out of the jet nozzle. The Simulation 1 indicates that the syrup-water (ambient-injected fluids) combination mixes far better than the syrup-syrup combination. The flow pattern of the first combination shows a rotation of the fluids throughout the tank instead of the push of one fluid by another in the latter. Research also showed that the syrup-water combination is what is expected of jet mixers, but not the syrup-syrup combination (Patwardhan and al., 2003) .
These results made us realize that, in a practical situation, it would be hard to make ropy syrup, a highly viscous fluid, get pushed out of a nozzle through another highly viscous fluid. We couldn’t expect it to mix well enough for a small quantity of water (the enzyme vehicle) to homogenize well throughout the tank. We then turned to a more standard mixing approach in commercial uses: a paddle mixer.
Mixer Type 2: Paddle Mixer
For this type of mixer, we only analyzed a ropy syrup and water (enzyme vehicle) combination because of the ability of paddles to mix without being affected by the viscosity, unlike the jet mixer. However, we studied two types of paddles to determine which one would be best.
Simulation 2: Comparison of mixing the ropy syrup with water (enzyme vehicle) in a paddle
mixer. Two types of paddles are shown in white in the middle of the tank: flat (left)
and cubic (right) paddles. The ropy syrup is shown in red and water is shown in blue. Intake
nozzles are located in the middle of both sides of the tank.
Simulation 2: Comparison of mixing the ropy syrup with water (enzyme vehicle) in a paddle
mixer. Two types of paddles are shown in white in the middle of the tank: flat (top)
and cubic (bottom) paddles. The ropy syrup is shown in red and water is shown in blue.
Intake
nozzles are located in the middle of both sides of the tank.
Simulation 2 shows the two types of paddles studied. In these simulations, it is important to know that the blue color not only represents the enzyme but its trajectory. When solid blue, this means that the enzyme has made contact with ropy syrup and is actively reacting. Red shows that the enzyme has not yet made contact with ropy syrup. Knowing so, it is easy to see higher turbulence with the cubic paddles, meaning better contact between the enzyme and the syrup. The flat paddles produce a smooth mixing, leaving bigger unmixed areas at the end of the simulation compared to cubic paddles.
Therefore, a paddle mixer using cubic paddles would be more efficient than one using flat paddles.
Limits: We are aware of the limitations imposed by a 2D aspect of a rotating impeller. The characteristics of 3D simulations are far more complicated and time-consuming. In the case of a real-world implementation, more accurate simulations will be done. The purpose of these simulations was to test two types of researched and recommended mixer models and propose a more suited model for further study.
Conclusion
As we established, we did not only use computing power to generate our results for the modeling aspect of aSAP 2021. It also involved research, data gathering, substantial learning and a lot of optimization to better represent what our project could offer in terms of CFD simulations.
Our Best Model: Paddle Mixer With Cubic Paddles
Between the models we tested, the paddle mixer with cubic paddles was the most appropriate model to mix our enzyme with ropy maple syrup. After doing these modeling experiments, we now have a much more solid idea of how aSAP can be implemented, a net improvement to this year’s project.
References
Arzate, A. (2010). Spécifications techniques pour la fabrication des barils destinés à contenir du sirop d’érable en vrac. Retrieved from https://gestion.centreacer.qc.ca/fr/UserFiles/publications/170_Fr.pdf
Patwardhan, A. W., & Gaikwad, S. G. (2003). Mixing in Tanks Agitated by Jets. Chemical Engineering Research and Design, 81(2), 211-220. doi:https://doi.org/10.1205/026387603762878674
Ebrahimi, M., Yaraghi, A., Ein-Mozaffari, F., & Lohi, A. (2018). The effect of impeller configurations on particle mixing in an agitated paddle mixer. Powder Technology, 332, 158-170. doi:https://doi.org/10.1016/j.powtec.2018.03.061
ANSYS (2016). ANSYS Fluent - CFD Software | ANSYS*
* Simulation videos used courtesy of ANSYS, Inc.