Difference between revisions of "Team:IISER-Tirupati India/Human Practices"

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                             <h3><strong>Implementation</strong></h3>
 
                             <h3><strong>Implementation</strong></h3>
                             <p><strong>Feedback</strong>: We discussed with her the fluid behavior under the influence of ciliary-peristalsis and furthermore various ways which we considered for injecting genetically modified bacteria, including direct delivery, two fluid delivery and injecting into the Ostia. Prof Paul helped us realise the challenges of each and suggested that <strong>using an existing method with minimum changes is the best solution.&nbsp;</strong></p>
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                             <p><strong>Feedback</strong>: We discussed with her the behaviour of Oviductal fluid under the fallopian tube conditions and various ways which we considered for injecting genetically modified bacteria, including direct delivery, two fluid delivery and injecting into the Ostia. Prof Paul helped us realise the challenges of each and suggested that <strong>using an existing method with minimum changes is the best solution.&nbsp;</strong></p>
 
                              
 
                              
 
                             <p><strong>Integration: </strong>We decided to find more techniques like hysterosalpingogram (advised by Dr Prameela).</p>
 
                             <p><strong>Integration: </strong>We decided to find more techniques like hysterosalpingogram (advised by Dr Prameela).</p>
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<p>Sophie wang is a science communicator who conveys her valuable message in Science and Technology Studies to the world through Zines. She is a member of Free Radicals, an activist collective dedicated to creating a more socially just, equitable, and accountable science.</p>
 
<h3><strong>Communication&nbsp;</strong></h3>
 
<h3><strong>Communication&nbsp;</strong></h3>
                             <p><strong>Feedback</strong>: She started with an important note on using proper terms, from our project title to our content in comics. We received an invaluable suggestion from her of communicating through <strong>interactive zines</strong>, which resonated with our thoughts about science communication. We discussed languages, drawing tools like 'wink', publishing platforms, and licenses. An important lesson: 'you needn't be a trained artist; anybody can draw and share their knowledge!"&nbsp;</p>
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                             <p><strong>Feedback</strong>: She started with an important note <strong>on using proper terms</strong>, from our project title to our content in comics. We received an invaluable suggestion from her of communicating through <strong>interactive zines</strong>, which resonated with our thoughts about science communication. We discussed languages, drawing tools like 'wink', publishing platforms, and licenses. An important lesson: 'you needn't be a trained artist; anybody can draw and share their knowledge!"&nbsp;</p>
 
                             <p><br /><strong>Integration: </strong>Thus, we decided to make an interactive zine, and for inclusivity, we decided to translate it to a regional language.Read more in <a class="text-primary" href="https://2021.igem.org/Team:IISER-Tirupati_India/Communication">communication</a></p>
 
                             <p><br /><strong>Integration: </strong>Thus, we decided to make an interactive zine, and for inclusivity, we decided to translate it to a regional language.Read more in <a class="text-primary" href="https://2021.igem.org/Team:IISER-Tirupati_India/Communication">communication</a></p>
 
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                             <p><strong>Feedback</strong>: He encouraged us to <strong>make handouts of our project in regional languages</strong> for efficient communication with the rural masses of India. He also shared his experience of holding sexuality education webinars during pandemics and how he witnessed a gradual decrease in people's attention span due course.&nbsp;</p>
 
                             <p><strong>Feedback</strong>: He encouraged us to <strong>make handouts of our project in regional languages</strong> for efficient communication with the rural masses of India. He also shared his experience of holding sexuality education webinars during pandemics and how he witnessed a gradual decrease in people's attention span due course.&nbsp;</p>
  
                             <p><strong>Integration: </strong>He inspired us to create our promo video in regional languages. The mentioning of the reduction in attention span led us to think of alternatives for webinars which led us to hold Instagram lives and post reels related to Sexual and Reproductive Health.</p>
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                             <p><strong>Integration: </strong>He inspired us to create <strong>our promo video in regional languages</strong>. The mentioning of the reduction in attention span led us to think of alternatives for webinars which led us to hold <strong>Instagram lives and post reels related to Sexual and Reproductive Health</strong>.</p>
 
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                             <p>Dr Khot is an IVF Specialist at Kalyan Hospital, Thane, Mumbai. We met her to learn about techniques like hysterosalpingogram, Hysteroscopy and catheter for our delivery mechanism.</p>
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                             <p>Dr Khot is an IVF Specialist at Kalyan Hospital, Thane, Mumbai. We met her to learn about techniques like Hysterosalpingogram, Hysteroscopy and catheter for our delivery mechanism.</p>
 
<h3><strong>Implementation&nbsp;</strong></h3>
 
<h3><strong>Implementation&nbsp;</strong></h3>
                             <p><strong>Feedback</strong>: She introduced each technique. One of our primary concerns was <strong>t</strong>he leaking of genetically engineered bacteria into the ovary, which is unwanted. We were assured that injecting a non-motile bacteria directly into the Ampulla would not cause leakage into the ovary.&nbsp;</p>
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                             <p><strong>Feedback</strong>: She introduced each technique. One of our primary concerns was the leaking of genetically engineered bacteria into the ovary, which is unwanted. We were assured that injecting a non-motile bacteria directly into the Ampulla would not cause leakage into the ovary.&nbsp;</p>
                             <p><strong>Integration: </strong>We read more about each technique and <strong>decide to improvise Hysteroscopy</strong>. We chose Hysteroscopy over cath lab because it necessitates the training of gynaecologists.</p>
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                             <p><strong>Integration: </strong>We read more about each technique and <strong>decide to use Hysteroscopy</strong>. We chose Hysteroscopy over catheter because it necessitates the training of gynaecologists.</p>
  
 
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                             <p>Sex Education India is a Youth-led movement motivated to give sex education to the Indian community. We integrated their insights about making the curricula for CSE in Indian Education System. Especially, they played a vital role in our journey of understanding the potential of the project being called a contraceptive for uterus owners.&nbsp;</p>
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                             <p>Sex Education India is a Youth-led movement motivated to give sex education to the Indian community. We integrated their insights about making the curricula for CSE in Indian Education System. Especially, they played a vital role in <strong>our journey of understanding the potential of the project being called a contraceptive for uterus owners.&nbsp;</strong></p>
 
                             <h3>Inclusivity</h3>
 
                             <h3>Inclusivity</h3>
 
                              
 
                              
 
                             <p><strong>Feedback</strong>: We discussed the various challenges associated with making CSE a reality in the Indian Collegiate system. We also discussed some crucial pointers for what a CSE committee on the college level should look like. This helped us gain insights on how to promote CSE in our colleges and our future outreach activities. They also helped us understand <strong>the significance of the usage of Inclusive languages and Gender Pronouns.</strong></p>
 
                             <p><strong>Feedback</strong>: We discussed the various challenges associated with making CSE a reality in the Indian Collegiate system. We also discussed some crucial pointers for what a CSE committee on the college level should look like. This helped us gain insights on how to promote CSE in our colleges and our future outreach activities. They also helped us understand <strong>the significance of the usage of Inclusive languages and Gender Pronouns.</strong></p>
 
                              
 
                              
                             <p><strong>Integration: </strong>This encouraged us to use pronouns within our team and suggest pronoun usage in iGEM&rsquo;s communication platform, Slack, as it helps the gender diverse community feel rightly addressed. This meeting also affirmed that our contraceptive could be widely used for uterus owners.</p>                            </div>
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                             <p><strong>Integration: </strong>This encouraged us to <strong>use pronouns within our team and suggest pronoun usage in iGEM&rsquo;s communication platform, Slack,</strong> as it helps the gender diverse community feel rightly addressed. This meeting also affirmed that our contraceptive could be widely used for uterus owners.</p>                            </div>
 
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                             <p>Dr Sabari is an Assistant Professor at IISER Thiruvananthapuram who is into extensive research in the field of Molecular Biology and Genetics. His lab work mostly with strains of Bacillus subtilis, which is our Model Organism. Hence, we met with him and gain insights into the genetics of Bacillus subtilis. He gave us indispensable suggestions on our experiments with Model Organism&nbsp;</p>
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                             <p>Dr Sabari is an Assistant Professor at IISER Thiruvananthapuram who is into extensive research in the field of Molecular Biology and Genetics. His lab work mostly with strains of <em>Bacillus subtilis</em>, which is our model organism. Hence, we met with him and gain insights into the genetics of <em>Bacillus subtilis</em>. He gave us indispensable suggestions on our experiments with Model Organism&nbsp;</p>
 
                             <h3>Wetlab</h3>
 
                             <h3>Wetlab</h3>
                             <p><strong>Feedback</strong>: Initially, we had thought of inserting our gene of interest into Bacillus subtilis using Replicative Plasmid for the expression of heterologous proteins. But, he made us understand how <strong>genome integration</strong> is more efficient as replicative plasmids are unstable within <em>Bacillus subtilis</em>. He helped us set our protocols for experiments with <em>Bacillus subtilis</em>. He was kind enough to provide the strain used in his lab, Bacillus subtilis 168 and Escherichia coli clones for Bacillus subtilis vector backbone.</p>
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                             <p><strong>Feedback</strong>: Initially, we had thought of inserting our gene of interest into <em>Bacillus subtilis</em> using Replicative Plasmid for the expression of heterologous proteins. But, he made us understand how <strong>genome integration</strong> is more efficient as replicative plasmids are unstable within <em>Bacillus subtilis</em>. He helped us set our protocols for experiments with <em>Bacillus subtilis</em>. He was kind enough to provide the strain used in his lab, <em>Bacillus subtilis</em> 168 and <em>Escherichia coli</em> clones for <em>Bacillus subtilis</em> vector backbone.</p>
                             <p><strong>Integration: </strong>As per his suggestion, we decided to do genome integration and used the strain and plasmids he provided us.</p>                            </div>
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                             <p><strong>Integration: </strong>As per his suggestion, we decided to do <strong>genome integration</strong> and used the strain and plasmids he provided us.</p>                            </div>
 
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                             <p>Dr Vemula is a leading scientist in the field of translational research in India. In a vision to build the bridge between discovery and delivery, his lab is solving the challenges in the medical field through an interactive and collaborative mode of research. The meetings were n enlightenment regarding the foundational steps of implementing OviCloak.</p>
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                             <p>Dr Vemula is a leading scientist in the field of translational research in India. In a vision to build the bridge between discovery and delivery, his lab is solving the challenges in the medical field through an interactive and collaborative mode of research. The meeting was an enlightenment regarding the foundational steps of implementing OviCloak.</p>
  
 
<h3>Implementation</h3>
 
<h3>Implementation</h3>
                             <p><strong>Feedback</strong>: He highlighted that building a <strong>solid &lsquo;Proof Of Concept (POC)&rsquo; </strong>is the prime step of implementation of a project as it is very crucial in acquiring funding for a project and attracting investors.Since OviCloak is a multifarious project, he advised us to find the essential elements of the concept and plan the PoC addressing the core functionalities.&nbsp;</p>
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                             <p><strong>Feedback</strong>: He highlighted that building a <strong>solid &lsquo;Proof Of Concept (POC)&rsquo; </strong>is the prime step of implementation of a project as it is very crucial in acquiring funding for a project and attracting investors. Since OviCloak is a multi-faceted project, he advised us to find the essential elements of the concept and plan the POC addressing the core functionalities.&nbsp;</p>
 
                             <p>The involvement of stakeholders plays a pivotal role in translational research which aids the product to meet the clinical benchmark&nbsp;</p>
 
                             <p>The involvement of stakeholders plays a pivotal role in translational research which aids the product to meet the clinical benchmark&nbsp;</p>
 
                             <p>He advised us to procure Intellectual Property Protection (IP) before involving any companies.</p>
 
                             <p>He advised us to procure Intellectual Property Protection (IP) before involving any companies.</p>
                             <p><strong>Integration: </strong>We reflected on our PoC and future aspects of it. For the PoC of biosafety, we plan to refer to the guidelines set by the regulatory board of synthetic biology in India and to plan the PoCs accordingly. We also decided to procure funds through various grants and government funds.</p>                            </div>
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                             <p><strong>Integration: </strong>We reflected on our POC and future aspects of it. For the POC of biosafety, we plan to refer to the guidelines set by the regulatory board of synthetic biology in India and to plan the POCs accordingly. We also decided to procure funds through various grants and government funds.</p>                            </div>
 
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                             <p>We met with her to know how OviCloak can fit the contraception needs of intersex, transgender, and gender-diverse communities. She appreciated the creativity and the practicality of our idea. She highlighted how inclusive OviCloak is as it is a <strong>non-hormonal contraceptive</strong>.&nbsp;</p>
 
                             <p>We met with her to know how OviCloak can fit the contraception needs of intersex, transgender, and gender-diverse communities. She appreciated the creativity and the practicality of our idea. She highlighted how inclusive OviCloak is as it is a <strong>non-hormonal contraceptive</strong>.&nbsp;</p>
 
                             <h3><strong>Inclusivity</strong></h3>
 
                             <h3><strong>Inclusivity</strong></h3>
                             <p><strong>Feedback</strong>: Our initial quest to find our potential stakeholders led us to realise that people with conditions like <strong>Congenital adrenal hyperplasia (</strong><strong>CAH)</strong><strong>,</strong><strong> Turner Syndrome, and people from a transmasculine spectrum</strong> could be our potential stakeholders.</p>
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                             <p><strong>Feedback</strong>: Our initial quest to find the potential stakeholders led us to realise that people with conditions like <strong>Congenital adrenal hyperplasia (</strong><strong>CAH)</strong><strong>,</strong><strong> Turner Syndrome, and people from a transmasculine spectrum</strong> could be our potential stakeholders. This inspired us to think about <strong>improved and inclusive designs of OviCloak</strong>. Thus dedicating our contraceptive to a broader spectrum of uterus owners.</p>
                            <p><strong>Integration: </strong>This inspired us to think about <strong>improved and inclusive designs of OviCloak</strong>. Thus dedicating our contraceptive to a broader spectrum of uterus owners.</p>
+
 
                              
 
                              
                             <p><strong>Feedback</strong>: She explained how being a <strong>non-hormonal contraceptive</strong> helps people undergoing hormone replacement therapy and people with conditions like CAH and Turner syndrome. She also pointed out a condition called <strong>Cloacal Exstrophy</strong>, which can be considered.</p>
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                             <p>Dr Grimstad pointed out another condition called <strong>Cloacal Exstrophy</strong>, which can be considered.She also explained how being a <strong>non-hormonal contraceptive</strong> helps people undergoing hormone replacement therapy and people with conditions like CAH and Turner syndrome.</p>
 
                             <p><strong>Integration: </strong>Hence, we read more about the condition and included them among our users. Read more in <a class="text-primary" href="https://2021.igem.org/Team:IISER-Tirupati_India/Inclusivity">inclusivity</a>.</p>
 
                             <p><strong>Integration: </strong>Hence, we read more about the condition and included them among our users. Read more in <a class="text-primary" href="https://2021.igem.org/Team:IISER-Tirupati_India/Inclusivity">inclusivity</a>.</p>
 
                             <h3><strong>Implementation&nbsp;</strong></h3>
 
                             <h3><strong>Implementation&nbsp;</strong></h3>
                             <p><strong>Feedback</strong>: She asked us to ponder some other delivery mechanisms as the proposed delivery mechanism may instil gender dysphoria in some patients and also for some it might not suit their anatomy.</p>
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                             <p><strong>Feedback</strong>: She asked us to ponder some other delivery mechanisms as the proposed delivery mechanism may instill <strong>gender dysphoria</strong> in some patients and also for some it might not suit their anatomy.</p>
 
                             <p><strong>Integration: </strong>We learned the anatomical differences in them and set on to finding an inclusive alternative.&nbsp;</p>                            </div>
 
                             <p><strong>Integration: </strong>We learned the anatomical differences in them and set on to finding an inclusive alternative.&nbsp;</p>                            </div>
 
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                     <h5 class="modal-title" id="exampleModalLabel">Deepika Upadhyay</h5>
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                     <h5 class="modal-title" id="exampleModalLabel">Dr Deepika Upadhyay</h5>
 
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                             <p>Dr Deepika is an associate professor at the Department of Management Studies at Maharshi Dayanand Saraswati University. We met her to get insights on building a business plan.&nbsp;</p>
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                             <p>Dr Deepika is an Associate professor at the Department of Management Studies at Maharshi Dayanand Saraswati University. We met her to get insights on building a business plan.&nbsp;</p>
 
                         <h3><strong>Implementation&nbsp;</strong></h3>   
 
                         <h3><strong>Implementation&nbsp;</strong></h3>   
 
<p><strong>Feedback</strong>: She asked us to reflect on the targeted users of our product. She encouraged us to figure out all the nitty-gritty details of OviCloak including raw materials, production, packaging, transportation, and distribution.</p>
 
<p><strong>Feedback</strong>: She asked us to reflect on the targeted users of our product. She encouraged us to figure out all the nitty-gritty details of OviCloak including raw materials, production, packaging, transportation, and distribution.</p>
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<p>The panel gave a holistic view into contraceptive product development including production, packaging, and distribution.&nbsp;</p>
 
<p>The panel gave a holistic view into contraceptive product development including production, packaging, and distribution.&nbsp;</p>
 
<ul>
 
<ul>
<li>Pre-clinical trials: The panel raised a query regarding the efficacy of using animal models in pre-clinical as Ovastacin-ZP2 interaction species-specific.</li>
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<li>Pre-clinical trials: The panel raised a query regarding <strong>the efficacy of using animal models</strong> in pre-clinical as Ovastacin-ZP2 interaction species-specific.</li>
<li>Delivery System: They raised concerns regarding the requirement of doctoral visits for introducing genetically engineered bacteria and invasiveness.</li>
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<li>Delivery System: They raised concerns regarding <strong>the requirement of doctoral visits</strong> for introducing genetically engineered bacteria and invasiveness.</li>
 
<li>Safety and Regulation: They appreciated our kill switch and asked us to determine the regulations on implementing OviCloak in the clinical setup. They asked us to consider the interaction between commensal and genetically modified bacteria.</li>
 
<li>Safety and Regulation: They appreciated our kill switch and asked us to determine the regulations on implementing OviCloak in the clinical setup. They asked us to consider the interaction between commensal and genetically modified bacteria.</li>
<li>Production: They encouraged us to figure out the infrastructure and conditions for setting up a manufacturing unit.</li>
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<li>Production: They encouraged us to figure out <strong>the infrastructure and conditions for setting up a manufacturing unit.</strong></li>
<li>Packing and Distribution: They made us understand the importance of strategies for maintaining cold-chain during procurement of our product by Large scale Procurement agencies.</li>
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<li>Packing and Distribution: They made us understand how important is <strong>strategies for maintaining cold-chain</strong> during procurement of our product by Large scale Procurement agencies.</li>
 
<li>Cost of Production: We learned that NGOs and Government agencies buy products from these Procurement Agencies through third parties. Hence a cheap product cost is necessary if we are proposing government subsidies.</li>
 
<li>Cost of Production: We learned that NGOs and Government agencies buy products from these Procurement Agencies through third parties. Hence a cheap product cost is necessary if we are proposing government subsidies.</li>
 
</ul>
 
</ul>
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                             <p><strong>Iterative feedback from our stakeholders and their integration helped us make the project good for the world, especially for the communities left uncared for.</strong></p>
 
                             <p><strong>Iterative feedback from our stakeholders and their integration helped us make the project good for the world, especially for the communities left uncared for.</strong></p>
 
                              
 
                              
                             <p><strong>Dr Madhulika Pathak</strong> , a doctoral researcher with a demonstrated history of working in academic research about mammalian embryo development helped us realize that our approach to contraception has been limited to the ideal reproductive tract anatomy and hormonal levels of "women". We were asked whether our contraceptive caters to the needs of individuals with <strong>Poly Cystic Ovarian Syndrome.</strong> We set out to improve upon this fact by connecting with another expert, <strong>Dr Prameela Menon- A gynecologist</strong>. She gave us direction in the improvement needed in the design.</p>
+
                             <p><strong>Dr Madhulika Pathak</strong>, a doctoral researcher with a demonstrated history of working in academic research about mammalian embryo development, helped us realize that our approach to contraception has been limited to the ideal reproductive tract anatomy and hormonal levels of "women". We were asked whether our contraceptive caters to the needs of individuals with <strong>Poly Cystic Ovarian Syndrome.</strong> We set out to improve upon this fact by connecting with another expert, <strong>Dr Prameela Menon- A gynecologist</strong>. She gave us direction in the improvement needed in the design.</p>
 
                              
 
                              
 
                             <p>Frequent discussions with our <strong>Institute's LGBTQIA+ awareness club, "Rainbows of IISER Tirupati", </strong>helped us understand the importance of individuals belonging to the transmasculine and intersex individuals as our stakeholders. This<strong> i</strong>nspired us to call OviCloak a "novel female contraceptive" instead of a "novel contraceptive for women as "woman" only refers to a particular gender of the gender binary.&nbsp;</p>
 
                             <p>Frequent discussions with our <strong>Institute's LGBTQIA+ awareness club, "Rainbows of IISER Tirupati", </strong>helped us understand the importance of individuals belonging to the transmasculine and intersex individuals as our stakeholders. This<strong> i</strong>nspired us to call OviCloak a "novel female contraceptive" instead of a "novel contraceptive for women as "woman" only refers to a particular gender of the gender binary.&nbsp;</p>
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                             <p>In the meeting with the NGO <strong>"Sex Education for India"</strong>, we understood the need for <strong>a more inclusive term</strong> as the term "female" is not inclusive of individuals belonging to the "transmasculine" and "intersex" communities who don't identify with the words "male" and "female". After brainstorming, we came up with a<strong> more inclusive title, </strong>'A novel contraceptive for Uterus owners'</p>
 
                             <p>In the meeting with the NGO <strong>"Sex Education for India"</strong>, we understood the need for <strong>a more inclusive term</strong> as the term "female" is not inclusive of individuals belonging to the "transmasculine" and "intersex" communities who don't identify with the words "male" and "female". After brainstorming, we came up with a<strong> more inclusive title, </strong>'A novel contraceptive for Uterus owners'</p>
 
                              
 
                              
                             <p>In our initial quest to broaden our end-user spectrum, we came across conditions like<strong> Congenital adrenal hyperplasia (CAH), Turner Syndrome, and people from a transmasculine spectrum </strong>who could be our potential stakeholders. In the meeting with <strong>Dr Frances Grimstad, </strong> she pointed out a condition called <strong>Cloacal Exstrophy</strong>, which can be considered.</p>
+
                             <p>In our initial quest to broaden our end-user spectrum, we came across conditions like<strong> Congenital adrenal hyperplasia (CAH), Turner Syndrome, and people from a transmasculine spectrum </strong>who could be our potential stakeholders. In the meeting with <strong>Dr Frances Grimstad, </strong> she pointed out another condition called <strong>Cloacal Exstrophy</strong>, which can be considered.</p>
 
                              
 
                              
 
                             <p>Thus, OviCloak became a <strong>contraceptive for all uterus owners.&nbsp;</strong></p>
 
                             <p>Thus, OviCloak became a <strong>contraceptive for all uterus owners.&nbsp;</strong></p>
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                             <p>We continued our quest for an alternative, and it was meeting with <strong>Prof Debjani Paul, an Associate professor in the Department of Biosciences and Bioengineering at IIT Bombay</strong> that we realised the challenges of considered alternatives like direct delivery, two fluid delivery and injecting into the Ostia. Dr Prameela and Dr Paul suggested that <strong>using an existing method with minimum changes is the best solution</strong>.&nbsp;</p>
 
                             <p>We continued our quest for an alternative, and it was meeting with <strong>Prof Debjani Paul, an Associate professor in the Department of Biosciences and Bioengineering at IIT Bombay</strong> that we realised the challenges of considered alternatives like direct delivery, two fluid delivery and injecting into the Ostia. Dr Prameela and Dr Paul suggested that <strong>using an existing method with minimum changes is the best solution</strong>.&nbsp;</p>
 
                              
 
                              
                             <p>In the meeting with <strong>Dr Sidra Khot, an IVF expert</strong> we learned about hysterosalpingogram, Hysteroscopy and catheters. We knocked out hysterosalpingogram as it is only familiar to fertility experts leading to reduced accessibility. Similarly, Catheter needs a well-trained gynecologist for its operation.</p>
+
                             <p>In the meeting with <strong>Dr Sidra Khot, an IVF expert</strong> we learned about hysterosalpingogram, Hysteroscopy and catheters. We knocked out hysterosalpingogram as it is only familiar to fertility experts leading to reduced accessibility. Similarly, Catheter needs a well-trained gynaecologist for its operation.</p>
 
                              
 
                              
 
                             <p>Thus, by integrating the feedback from the stakeholders mentioned above, we decided to deliver the genetically modified bacteria with a technique called <strong>Hysteroscopy</strong>, as it is more accessible.</p>
 
                             <p>Thus, by integrating the feedback from the stakeholders mentioned above, we decided to deliver the genetically modified bacteria with a technique called <strong>Hysteroscopy</strong>, as it is more accessible.</p>
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                                                     <h5>Ms Sophie Wang</h5>
 
                                                     <h5>Ms Sophie Wang</h5>
                                                     <p>Science communicator, Free Rad</p>  
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                                                     <p>Science communicator, Free Radicals</p>  
 
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                                                     <h5>Sex Education India</h5>
 
                                                     <h5>Sex Education India</h5>
                                                     <p>NGO</p>  
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                                                     <p>Sex Ed, NGO</p>  
 
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                                                 <img class="hp-timeline-image" src="https://static.igem.org/mediawiki/2021/e/e8/T--IISER-Tirupati_India--Deepika.jpg" alt="...">
 
                                                 <img class="hp-timeline-image" src="https://static.igem.org/mediawiki/2021/e/e8/T--IISER-Tirupati_India--Deepika.jpg" alt="...">
 
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                                                     <h5>Dr Deepika Upadhyay</h5>
 
                                                     <p>Associate Professor, Department of Management Studies, Maharshi Dayanand Saraswati University, Ajmer
 
                                                     <p>Associate Professor, Department of Management Studies, Maharshi Dayanand Saraswati University, Ajmer
 
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Revision as of 20:58, 20 October 2021


Ovi-Cloak

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OviCloak, throughout its journey, endeavoured to be a people’s project. From brainstorming to implementation, we involved our stakeholders. Our vision was to make our stakeholders understand the design of the project, know their desire and close the loop between both.

OviCloak being a proposed synthetic biology alternative for existing contraceptives, demands thoughtfulness about whether it is responsible and good for the world. Through our human practices, we tried to achieve this via :

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Fig 1. Strategies adopted for planning our Human Practices : Reflection - Thinking about the needs and values of the project, Responsibility - Knowing the responsibilities of the project, Responsiveness - Closing the loop between desired and designer

Our team initiated thoughtfulness from the brainstorming sessions in which the problems we wished to address spanned from poverty to plastic pollution. We came up with solutions using synthetic biology to tackle these problems. However, we also verified if our proposed synthetic biology methods are better than the existing solutions/proposed solutions to these problems. 

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Fig 2. A snap from our brainstorming session with PIs

“About 22.2 million unintended pregnancies in 43 developing countries are due to contraceptive failure.”

“Between 2000 and 2009, the use of modern contraceptives is seen to increase by only 2.1%. WHO points out that limited access to services, fear or experience of side-effects; poor quality of available services are the major reasons for this slower increase. “

“In India, an irreversible procedure like female sterilization is preferable for more than 75% of cases that take away the individual’s right to plan families.”

This caught our attention! We recognised that being an integral part of society, the lack of a sustainable & empowering contraceptive affects the safety of individuals globally & thus this issue demands the centre stage. We wished to bestow an effective and safe alternative to the 933 million contraceptive users through synthetic biology. 

Thus, our journey towards OviCloak started. 

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Fig 3. Tasks done as a part of Reflection

  • Stakeholder analysis

The analysis section of The iGEMers Guide to the Future helped us contemplate the values that we want to embed for the potential users of OviCloak through the stakeholder/value matrix. Health (Safety), Environmental Safety, Autonomy/individual choice are values we wish to embed and as well as fulfilled by OviCloak.

  • Market Survey

Further, to understand what needs and values are our stakeholders looking forth in our project and to evaluate whether the values fulfilled OviCloak meet their preferences, we decided to conduct a market survey. We found that a significant fraction of the contraceptive users were seen to experience side effects, hence our vision of prioritising health safety will be endorsed by our stakeholders. Least to no side effects, environmental safety, reversibility and long-term action of the contraceptive were some of the attributes respondents felt important for their contraceptive.These are values OviCloak wishes to fulfil.

Thus, we felt that OviCloak would benefit the contraceptive users. 

Market Survey PDF

  • Meeting with stakeholders

Through meetings with Stakeholders, We could understand the importance of some values which were left unaddressed.

  • SWOT Analysis

We performed a SWOT analysis to reflect the strength, weaknesses, opportunities and threats of our project.

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Fig 4. Tasks done as a part of Responsibility
  • Stakeholder identification

  • Trulli
    Fig 5. The stakeholders we identified for OviCloak

    Identifying the stakeholders was the first step in comprehending the importance of the team and project being safe and responsible.

  • SWOT Analysis

  • From SWOT analysis, we understood the threats posed by our projects such as lack of awareness about contraception in civilians, horizontal gene transfer or biosafety and lack of funding.

  • The values and risks workshop

  • We attended the values and risks workshop conducted by iGEM Ambassadors.

  • Responsible Research

  •  Our team strived to be responsible and safe throughout the project inside and outside labs by adhering to lab rules and COVID-19 protocols. Read more in Safety.

We understood that our project has a great potential to impact the world outside the lab. For this, we strived to set up a two-way dialogue between us and the world.

Our aim was to :

  • Learn about the world outside the lab
  • Integrate the learning into our project.

This was achieved by a strategic move by our team as the following : 

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Stakeholder Identification

Stakeholder identification which was done as a part of our reflection was the cornerstone for responsiveness.

Reaching out

Finding out the identified stakeholders and experts were challenging. The ongoing pandemic necessitated doing our human practices responsibly with limited personal contact.

With constant online search, we could find contacts (Mail Id, contact number) of experts. Social Platforms such as LinkedIn and Instagram helped us a lot in this step. Some experts were kind enough to introduce us to some other experts and stakeholders. 

Engaging with stakeholders was still a challenge due to COVID-19 restrictions, so we thought why not start from our home. We conducted in-depth interviews with our family members of 18+ age, thereby initiating the conversation around sexual and reproductive health from our homes.

Engaging with stakeholders and Experts.

We opted for In-Depth Interviews for one-on-one engagement with our stakeholders and experts. While surveys came to the rescue to engage with a large population of stakeholders.

We strived to adhere to all COVID-19 regulations as well as ethics while doing human research. Read more in Safety.

Closing the loop

Analysis

We analysed the IDIs and Surveys. Surveys were analysed and infographics were made for better representation.

Integrating 

Closing the loop between what is designed and desired is at the heart of our human practices. We strived to do that through :

  • Discussing the feedback and selecting the relevant ones on the basis of values chosen.
  • Conducting literature surveys or testing through mathematical modelling.
  • Engaging with the stakeholder to get feedback on integration.

This is iterated throughout our project. This feedback and integration helped us build a people’s project.

INTEGRATED HUMAN PRACTICES

How iHP moulded OviCloak

Our stakeholders played an unequivocal role in the shaping of OviCloak. Here, we highlight how our Human Practices informed our ethical, technical, safety and communication decisions and closed the loop between what is desired and designed.

To know details, see timeline below

Feasibility and Desirability

In our Initial social science research, we understood the need for a novel contraceptive. 

  • In addition to this, we conducted In-Depth Interviews to learn about the general opinion of people on existing contraceptives and their perspective on the need for new contraceptives. We also wanted to know about people’s views on OviCloak and the usage of a GMO for contraception. Keeping in view the COVID-19 restrictions, we conducted In-Depth Interviews with our family members and friends of 18+ age. Since our team members are from different parts of India, we could ensure the diversity of the respondents by conducting this with people at various locations in India.

See the detailed analysis of IDI here.

  • Through reflection, we wished to embed safety and autonomy into our project. Interaction with stakeholders helped us understand the other values we left out and prioritise the values.

Read more in Reflection to know the needs or values we prioritized in our project’s design and the compromises made by us.

Broadening the spectrum of End-users

Iterative feedback from our stakeholders and their integration helped us make the project good for the world, especially for the communities left uncared for.

Dr Madhulika Pathak, a doctoral researcher with a demonstrated history of working in academic research about mammalian embryo development, helped us realize that our approach to contraception has been limited to the ideal reproductive tract anatomy and hormonal levels of "women". We were asked whether our contraceptive caters to the needs of individuals with Poly Cystic Ovarian Syndrome. We set out to improve upon this fact by connecting with another expert, Dr Prameela Menon- A gynecologist. She gave us direction in the improvement needed in the design.

Frequent discussions with our Institute's LGBTQIA+ awareness club, "Rainbows of IISER Tirupati", helped us understand the importance of individuals belonging to the transmasculine and intersex individuals as our stakeholders. This inspired us to call OviCloak a "novel female contraceptive" instead of a "novel contraceptive for women as "woman" only refers to a particular gender of the gender binary. 

Trulli
Fig 7. How integration of our human practices broadened our end-users spectrum

In the meeting with the NGO "Sex Education for India", we understood the need for a more inclusive term as the term "female" is not inclusive of individuals belonging to the "transmasculine" and "intersex" communities who don't identify with the words "male" and "female". After brainstorming, we came up with a more inclusive title, 'A novel contraceptive for Uterus owners'

In our initial quest to broaden our end-user spectrum, we came across conditions like Congenital adrenal hyperplasia (CAH), Turner Syndrome, and people from a transmasculine spectrum who could be our potential stakeholders. In the meeting with Dr Frances Grimstad, she pointed out another condition called Cloacal Exstrophy, which can be considered.

Thus, OviCloak became a contraceptive for all uterus owners. 

Design of Genetic Circuit

Initially, we had a progesterone-induced approach for regulating Ovastacin production. In the meeting with Dr Satish Gupta, an Emeritus Scientist at the National Institute of Immunology, he pointed out the importance of sensitivity of the transcription factor, SRTF1, for efficient regulation during minimal Progesterone production. Hence, we set out to look for alternative sensing molecules as we found SRTF1 has less sensitivity to sense the minimal concentration of Progesterone during the onset of ovulation[2].

Meanwhile, we met with Dr Prameela Menon, a gynaecologist. She raised the concern regarding the late expression of Ovastacin, as the fertilisation window is very short. So, we set out to look into an alternative design for the regulation of Ovastacin.

Eventually, we came up with Progesterone repressed regulatory systems for Ovastacin production, which overcame the previous concerns.

Safety 

The prime value we wished to embed in OviCloak was Safety, which is not complete without Biosafety. Hence, we gave importance to the kill switch module of our project and most importantly, we made a constant effort to get feedback and integrate them into our kill switches.

Initially, our project was designed to have a kill switch for reversibility which was thought to prevent the unintentional release of genetically modified commensal. But, Dr Gupta raised the concern of dissemination of genetically modified commensal into the environment. So, we reflected on the scenarios where engineered bacteria can escape the fallopian tube. This led to thorough literature surveys [3][4] and designing a kill switch for biosafety.

In the meeting with Dr Pathak , she raised the concern of leaky expression in the proposed model of the kill switches. We set out to look for a better design with non-leaky expressions. Eventually, we decided to use the toxin-antitoxin system for the kill switch as it seems to control leaky expression [5]. 

Once the genetic circuit design for both the kill switches was ready, we met with Dr Brenda Wilson, a microbiologist from the University of Illinois. Dr Wilson pointed out the possibility of a toxic shock from the endotoxins released on the activation of the kill switch. She suggested alternatives to the kill switch, such as using antibiotics and a replication inhibitor called Psoralen, which can prevent the growth of bacteria instead of killing them. This was indeed a matter of thought which we wish to incorporate into our kill switch in the future.

Bringing OviCloak into Real world

Our meetings with experts helped us understand the challenges and scope of improvement to bring OviCloak to the real world. 

Delivery System

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Fig 8. Delivery System chosen based on integrating stakeholders' feedback

In the initial months of our project, we thought of improvising an IUD to deliver the genetically engineered bacteria into the fallopian tube. On reflection, we didn’t want to develop a device that would stay inside the uterus of the user.

We continued our quest for an alternative, and it was meeting with Prof Debjani Paul, an Associate professor in the Department of Biosciences and Bioengineering at IIT Bombay that we realised the challenges of considered alternatives like direct delivery, two fluid delivery and injecting into the Ostia. Dr Prameela and Dr Paul suggested that using an existing method with minimum changes is the best solution

In the meeting with Dr Sidra Khot, an IVF expert we learned about hysterosalpingogram, Hysteroscopy and catheters. We knocked out hysterosalpingogram as it is only familiar to fertility experts leading to reduced accessibility. Similarly, Catheter needs a well-trained gynaecologist for its operation.

Thus, by integrating the feedback from the stakeholders mentioned above, we decided to deliver the genetically modified bacteria with a technique called Hysteroscopy, as it is more accessible.

Dr Brenda and Ms Nalini raised concerns regarding the user-friendliness of our delivery system. Finding a delivery system, which can deliver the genetically engineered bacteria in a more user-friendly way is our future prospective.

Implementation

Dr Praveen Vemula, a translational researcher, made us understand the importance of proof of concept for each aspect of our project. We were advised to go through safety regulatory guidelines and plan the proof of concept accordingly for biosafety.

Dr Diana Blithe, The Chief of Contraceptive Development Program at the National Institutes of Health, U.S. Department of Health and Human Services and the Co-director of the Contraceptive Clinical Trials Network helped us understand the steps in pre-clinical and clinical trials which OviCloak have to undergo before potential approval by Regulatory boards. 

To figure out the possibilities of a business model, we met Dr Deepika Upadhyay, an associate professor at the Department of Management Studies at Maharshi Dayanand Saraswati University and brainstormed the end-users. This led us to conclude that our product could be better marketed to an urban/suburban population and subsequently cost subsidised to cater to rural populations’ needs.

We met with Six experts from FHI 360, a nonprofit human development organization with a history in family planning and reproductive health projects. They gave us invaluable insights into the manufacturing and post-production processes, including packaging and delivery. We got to know about the procedures OviCloak, undergoes before it gets subsidised by the Governmental Organisation or marketed. They raised concern regarding maintaining cold-chain during delivery, as it is a crucial factor during procurement by agencies

Read more on our vision about bringing OviCloak into the real world in Implementation.

Communication

The stakeholder engagement was the inspiration behind our educational activities related to sexual and reproductive well-being. 

Meeting Ms Kathy Walkiling was eye-opening as her experience of launching Ecofemme, a menstrual hygiene start-up, made us understand that the stigma surrounding the use of sexual and reproductive health products can be a challenge to implement OviCloak. Thus, we realized the importance of spreading awareness about sexual and reproductive health along with developing a novel contraceptive. This led us to collect data regarding the status of awareness on Reproductive Health and Rights as well as Conducting Sexual and Reproductive Health awareness sessions such as webinars, social media posts and virtual art exhibitions.

We met with Mr Kaustubh Jogelkhar, who is the senior counsellor at an NGO called Pankh that educates young minds about sexual and Reproductive health. The most important takeaway message from him was to deliver the content that fits the short attention span of the current generation. Hence, we explored the possibility of reaching the audience through social media platforms like Instagram reels and Instagram Live sessions.

 Ms Sophie Wang, a communicator from the online magazine ‘Biorad’ made us understand the impact of Interactive Zines through her work..This Idea amazed us all, as this perfectly fits into the iGEM’s human practices strategy, setting a two-way dialogue. 

Integrated Human Practices Timeline

March

April

May

June

July

Aug

Sep

References

  1. Lund University. (2016, March 4). Estrogen in birth control pills has a negative impact on fish. ScienceDaily
  2. Grazon, C., Baer, R. C., Kuzmanović, U., Nguyen, T., Chen, M., Zamani, M., ... & Galagan, J. E. (2020). A progesterone biosensor derived from microbial screening. Nature communications, 11(1), 1-10
  3. Patiño, R., Bolamba, D., Thomas, P., & Kumakura, N. (2005). Effects of external pH on hormonally regulated ovarian follicle maturation and ovulation in Atlantic croaker.General and comparative endocrinology, 141(2), 126–134. https://doi.org/10.1016/j.ygcen.2004.12.006
  4. Shi, D., Komatsu, K., Hirao, M., Toyooka, Y., Koyama, H., Tissir, F., ... & Fujimori, T. (2014). Celsr1 is required for the generation of polarity at multiple levels of the mouse oviduct. Development, 141(23), 4558-4568.
  5. Brantl, S., & Müller, P. (2019). Toxin Antitoxin Systems in Bacillus subtilis. Toxins, 11(5), 262. https://doi.org/10.3390/toxins11050262 
  6. https://live.flatland.agency/12290417/rathenau-igem/  
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