Difference between revisions of "Team:UGM Indonesia/Description"

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                 <li><a class="dropdown-item" href="https://2021.igem.org/Team:UGM_Indonesia/Human_Practices">Integrated Human Practices</a></li>
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                 <li><a class="dropdown-item" href="https://2021.igem.org/Team:UGM_Indonesia/Human_Practices">Human Practices</a></li>
 
                  
 
                  
 
                 <li><a class="dropdown-item" href="https://2021.igem.org/Team:UGM_Indonesia/Communication">Education and Communication</a></li>
 
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             Abstract
 
             Abstract
 
         </h4>
 
         </h4>
         <p class="lh-lg">
+
         <p>
             A gold bioleaching process involves cyanide compounds whose waste can result in various harms in our environments. Several treatments using physical and chemical concepts possess some disadvantages. Coming with those problems, a cyanide-regulating system developed through the Auviola project was designed to produce and subsequently degrade the cyanide. This system utilized an engineered <i>Chromobacterium violaceum</i> whose profile of proteins facilitate cyanide production and degradation in the gold bioleaching process. The kinetic models and genomic scale models were demonstrated in order to show the optimization of cyanide production and degradation. Lastly, several implementations for human practices were planned to bring achievable and beneficial impacts for the gold mining communities and also the students to know about synthetic biology.
+
             The creation of a sustainable non-mercury gold processing technology has become a considerable challenge. An efficient gold extraction process with less complicated wastewater treatment to minimize the production cost is the ultimate objective of our Auviola project. Bioleaching based on the cyanide-producing bacterium will be engineered, improving the gold extraction and subsequently degrading the off-process cyanide. The Auviola project utilized an engineered Chromobacterium violaceum. To optimize and design the system, kinetic and genomic scale models were demonstrated in both the extraction process and the cyanide degradation afterward. The bioreactor was also designed as the pilot scale for implementing the engineered gold bioleaching process. In the future, this project has the potential to be implemented as a sustainable low-cost gold bioleaching system for the artisanal and small-scale gold miners to bring achievable and beneficial impacts. Moreover, we also contribute to educating the students for understanding and implementing synthetic biology.
 
         </p>
 
         </p>
 
     </section>
 
     </section>
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         <figure class="my-2 text-center">
 
         <figure class="my-2 text-center">
 
             <img alt="Massive kills of fish caused by cyanide" class="figure-img img-fluid rounded" src="https://static.igem.org/mediawiki/2021/c/c4/T--UGM_Indonesia--img--description-figure-1.png"/>
 
             <img alt="Massive kills of fish caused by cyanide" class="figure-img img-fluid rounded" src="https://static.igem.org/mediawiki/2021/c/c4/T--UGM_Indonesia--img--description-figure-1.png"/>
             <figcaption class="figure-caption"><b>Figure 1.</b> Massive kills of fish caused by cyanide (source: youtu.be/wlYgYsbJhps&amp;t=405s).</figcaption>
+
             <figcaption class="figure-caption"><b>Figure 1.</b> Massive kills of fish caused by cyanide (source: <a href="https://youtu.be/wlYgYsbJhps&amp;t=405s" target="_blank">youtu.be/wlYgYsbJhps&amp;t=405s</a>).</figcaption>
 
         </figure>
 
         </figure>
         <p class="lh-lg">
+
         <p>
 
             Gold is one of the noble metals which becomes a major economic driver for many countries. Its production requires a gold extraction step to obtain the pure ones from its orebody, for instance a leaching process that aims to separate the gold from other traces. Cyanide is one of these leaching agents that is widely used owing to the effective gold separation.1 However, cyanide waste can result in various harms in our environments, such as the decline of water quality and subsequently cause massive kills of aquatic organisms. Moreover, it also may threaten our health once it exposes our communities.
 
             Gold is one of the noble metals which becomes a major economic driver for many countries. Its production requires a gold extraction step to obtain the pure ones from its orebody, for instance a leaching process that aims to separate the gold from other traces. Cyanide is one of these leaching agents that is widely used owing to the effective gold separation.1 However, cyanide waste can result in various harms in our environments, such as the decline of water quality and subsequently cause massive kills of aquatic organisms. Moreover, it also may threaten our health once it exposes our communities.
 
         </p>
 
         </p>
         <p class="lh-lg">
+
         <p>
 
             Up to 20% of the world’s gold comes from Artisanal and small-scale gold mining (ASGM), which is a gold mining community conducted by individuals or small enterprises with limited capital investment and production.2 ASGM becomes a big concern especially in Indonesia as it supports 1 million people’s livelihoods.3 Along with its high effectiveness, cyanide is widely utilized by ASGM as a leaching agent in the hydrometallurgical process.1
 
             Up to 20% of the world’s gold comes from Artisanal and small-scale gold mining (ASGM), which is a gold mining community conducted by individuals or small enterprises with limited capital investment and production.2 ASGM becomes a big concern especially in Indonesia as it supports 1 million people’s livelihoods.3 Along with its high effectiveness, cyanide is widely utilized by ASGM as a leaching agent in the hydrometallurgical process.1
 
         </p>
 
         </p>
         <p class="lh-lg">
+
         <p>
             However, a study showed that the soil and plants nearby the ASGM has cyanide concentration higher than World and Health Organization (WHO) standard, indicating either the presence of cyanide leakage or improper waste treatment within the practices.4 In addition, a demand of 90 days-treatment of cyanide waste may increase the risk of leakage occurrence.1 Moreover, the limited performance of resources involved in ASGM perplexes people to achieve a proper cyanide waste treatment.5  
+
             However, a study showed that the soil and plants nearby the ASGM has cyanide concentration higher than World and Health Organization (WHO) standard, indicating either the presence of cyanide leakage or improper waste treatment within the practices.4 In addition, a demand of 90 days-treatment of cyanide waste may increase the risk of leakage occurrence.1 Moreover, the limited performance of resources involved in ASGM perplexes people to achieve a proper cyanide waste treatment.5
 
         </p>
 
         </p>
         <p class="lh-lg">
+
         <p>
 
             Other alternatives that may be utilized by ASGM communities; i.e. pyrometallurgy and biohydrometallurgy. Pyrometallurgy as an alternative gold extraction method is unsuitable for ASGM as it needs huge energy sources for the 600oC-heating process.6 Therefore, another approach for gold extraction is needed to achieve a proper implementation among ASGM.
 
             Other alternatives that may be utilized by ASGM communities; i.e. pyrometallurgy and biohydrometallurgy. Pyrometallurgy as an alternative gold extraction method is unsuitable for ASGM as it needs huge energy sources for the 600oC-heating process.6 Therefore, another approach for gold extraction is needed to achieve a proper implementation among ASGM.
 
         </p>
 
         </p>
         <p class="lh-lg">
+
         <p>
             On the other hand, a biohydrometallurgy that involves organism in the gold extraction process becomes a promising alternative as it provides faster waste treatment due to the enzymatic process, resulting in a reduced risk of cyanide leakage. In addition, a bacterium <i>Chromobacterium violaceum</i> has been found to produce cyanide as well as degrade it, therefore may be developed into biohydrometallurgy to a simpler and more applicable leaching process as well as prevent improper waste treatment.7
+
             On the other hand, a biohydrometallurgy that involves organism in the gold extraction process becomes a promising alternative as it provides faster waste treatment due to the enzymatic process, resulting in a reduced risk of cyanide leakage. In addition, a bacterium Chromobacterium violaceum has been found to produce cyanide as well as degrade it, therefore may be developed into biohydrometallurgy to a simpler and more applicable leaching process as well as prevent improper waste treatment.7
 
         </p>
 
         </p>
 
         <figure class="my-2 text-center">
 
         <figure class="my-2 text-center">
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             Approach
 
             Approach
 
         </h4>
 
         </h4>
         <p class="lh-lg">
+
         <p>
             With the concepts of synthetic biology, we are developing Auviola–an engineered <i>C. violaceum</i> with an on-off system for cyanide regulation in the gold bioleaching process. Compared to the wild-type, the new <i>C. violaceum</i> is engineered to have more cyanide-regulating genes, resulting in a better gold dissolution and cyanide waste treatment. This engineered bacterium is designed to function in a bioreactor to create the bioleaching system on an industrial scale. Along with this genetic engineering, we hope that this project may help many ASGM communities to create the best yield of gold.
+
             With the concepts of synthetic biology, we are developing Auviola–an engineered C. violaceum with an on-off system for cyanide regulation in the gold bioleaching process. Compared to the wild-type, the new C. violaceum is engineered to have more cyanide-regulating genes, resulting in a better gold dissolution and cyanide waste treatment. This engineered bacterium is designed to function in a bioreactor to create the bioleaching system on an industrial scale. Along with this genetic engineering, we hope that this project may help many ASGM communities to create the best yield of gold.
 
         </p>
 
         </p>
 
         <blockquote class="fs-4 my-5 mx-auto text-center">
 
         <blockquote class="fs-4 my-5 mx-auto text-center">
             “This <b>Auviola</b> project engineers <i>C. violaceum</i> to have more cyanide-regulating genes, resulting in a better gold dissolution and cyanide waste treatment”
+
             “This Auviola project engineers C. violaceum to have more cyanide-regulating genes, resulting in a better gold dissolution and cyanide waste treatment”       </blockquote>
        </blockquote>
+
 
     </section>
 
     </section>
 
     <section id="idea">
 
     <section id="idea">
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             How does this idea come to us?
 
             How does this idea come to us?
 
         </h4>
 
         </h4>
         <p class="lh-lg">
+
         <p>
 
             Indonesia is one of the biggest gold producing countries with more than one hundred tons production in 2020.8 Moreover, there are plenty of ASGM practices directly organized by more than 300,000 inhabitants in Indonesia to give additional incomes.9
 
             Indonesia is one of the biggest gold producing countries with more than one hundred tons production in 2020.8 Moreover, there are plenty of ASGM practices directly organized by more than 300,000 inhabitants in Indonesia to give additional incomes.9
 
         </p>
 
         </p>
         <p class="lh-lg">
+
         <p>
 
             The use of gold is not limited to jewelry as it also possesses a lot of financial, electrical, and medicinal purposes. Despite this digital era, gold is still persistent to be used as an investment. Gold is also widely used as a memory chip and conductor for electronics. As for now, gold is broadly developed as diagnostic tools, photothermal therapy agents, drug carriers, and other medicinal uses. Therefore, the development for an environmentally friendly bioleaching model may aid to the improvement of those gold utilizations.
 
             The use of gold is not limited to jewelry as it also possesses a lot of financial, electrical, and medicinal purposes. Despite this digital era, gold is still persistent to be used as an investment. Gold is also widely used as a memory chip and conductor for electronics. As for now, gold is broadly developed as diagnostic tools, photothermal therapy agents, drug carriers, and other medicinal uses. Therefore, the development for an environmentally friendly bioleaching model may aid to the improvement of those gold utilizations.
 
         </p>
 
         </p>
         <p class="lh-lg">
+
         <p>
             According to plenty of gold producers, this Auviola project has the potential to be developed as a better system of bioleaching process, especially in the ASGM practices. Coming with the merits of gold, we wish that we will create a big impact in reducing cyanide leakage and improving proper cyanide waste treatment through utilizing Auviola within the communities.
+
             According to plenty of gold producers, this Auviola project has the potential to be developed as a better system of bioleaching process, especially in the ASGM practices. Coming with the merits of gold, we wish that we may create a big impact in reducing cyanide leakage and improving proper cyanide waste treatment through utilizing Auviola within the communities.
 
         </p>
 
         </p>
 
     </section>
 
     </section>
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         </h4>
 
         </h4>
 
         <ol>
 
         <ol>
             <li class="lh-lg">Kementerian Lingkungan Hidup dan Kehutanan, 2020, Teknologi Pengolahan Emas pada Pertambangan Emas Skala Kecil di Indonesia, GOLD-ISMIA, Jakarta.</li>
+
             <li>Kementerian Lingkungan Hidup dan Kehutanan, 2020, Teknologi Pengolahan Emas pada Pertambangan Emas Skala Kecil di Indonesia, GOLD-ISMIA, Jakarta.</li>
             <li class="lh-lg">PlanetGOLD, 2021, ASGM 101: A Primer on Mercury Use in Artisanal and Small-Scale Gold Mining [Online] https://www.planetgold.org/asgm-101 [accessed on September 25th, 2021 13:35 WIT].</li>
+
             <li>PlanetGOLD, 2021, ASGM 101: A Primer on Mercury Use in Artisanal and Small-Scale Gold Mining [Online] https://www.planetgold.org/asgm-101 [accessed on September 25th, 2021 13:35 WIT].</li>
             <li class="lh-lg">PlanetGOLD, 2021, Indonesia: Phasing out mercury, protecting livelihoods [Online] https://www.planetgold.org/indonesia [accessed on September 25th, 2021 13:37 WIT].</li>
+
             <li>PlanetGOLD, 2021, Indonesia: Phasing out mercury, protecting livelihoods [Online] https://www.planetgold.org/indonesia [accessed on September 25th, 2021 13:37 WIT].</li>
             <li class="lh-lg">Suhadi, Sueb, Muliya, B.K., Ashoffi, A.M., 2021, Pollution of mercury and cyanide soils and plants in surrounding in the Artisanal and Small-Scale Gold Mining (ASGM) at Sekotong District, West Lombok, West Nusa Tenggara, Biological Environment and Pollution, vol 1, no 1, pp 30-37.</li>
+
             <li>Suhadi, Sueb, Muliya, B.K., Ashoffi, A.M., 2021, Pollution of mercury and cyanide soils and plants in surrounding in the Artisanal and Small-Scale Gold Mining (ASGM) at Sekotong District, West Lombok, West Nusa Tenggara, Biological Environment and Pollution, vol 1, no 1, pp 30-37.</li>
             <li class="lh-lg">WHO, 2016, Artisanal and small-scale gold mining and health, WHO, Geneva.</li>
+
             <li>WHO, 2016, Artisanal and small-scale gold mining and health, WHO, Geneva.</li>
             <li class="lh-lg">Ojeda, M.W., Perino, E., Ruiz, M.C., 2009, Gold extraction by chlorination using a pyrometallurgical process, Minerals Engineering, vol 22, pp 409-411.</li>
+
             <li>Ojeda, M.W., Perino, E., Ruiz, M.C., 2009, Gold extraction by chlorination using a pyrometallurgical process, Minerals Engineering, vol 22, pp 409-411.</li>
             <li class="lh-lg">Batista, J.H. &amp; da Silva Neto, J.F., 2017, <i>Chromobacterium violaceum</i> Pathogenicity: Updates and Insights from Genome Sequencing of Novel Chromobacterium Species, Frontiers in Microbiology, vol 8, pp 1-7.</li>
+
             <li>Batista, J.H. &amp; da Silva Neto, J.F., 2017, Chromobacterium violaceum Pathogenicity: Updates and Insights from Genome Sequencing of Novel Chromobacterium Species, Frontiers in Microbiology, vol 8, pp 1-7.</li>
             <li class="lh-lg">Goldhub, 2021, Gold mine production [Online] https://www.gold.org/goldhub/data/historical-mine-production [accessed on July 10th, 2021 19:42 WIT].</li>
+
             <li>Goldhub, 2021, Gold mine production [Online] https://www.gold.org/goldhub/data/historical-mine-production [accessed on July 10th, 2021 19:42 WIT].</li>
             <li class="lh-lg">Kementerian Lingkungan Hidup dan Kehutanan, 2020, ​Pertambangan emas skala kecil (PESK): Tantangan dalam akses pembiayaan [Online] http://sib3pop.menlhk.go.id/index.php/articles/view?slug=pertambangan-emas-skala-kecil-pesk-tantangan-dalam-akses-pembiayaan [accessed on August 7th, 2021 22:34 WIT].</li>
+
             <li>Kementerian Lingkungan Hidup dan Kehutanan, 2020, ​Pertambangan emas skala kecil (PESK): Tantangan dalam akses pembiayaan [Online] http://sib3pop.menlhk.go.id/index.php/articles/view?slug=pertambangan-emas-skala-kecil-pesk-tantangan-dalam-akses-pembiayaan [accessed on August 7th, 2021 22:34 WIT].</li>
 
         <ol>
 
         <ol>
 
     </ol></ol></section>
 
     </ol></ol></section>

Revision as of 07:56, 1 October 2021

<!DOCTYPE html> Description

Description

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Abstract

The creation of a sustainable non-mercury gold processing technology has become a considerable challenge. An efficient gold extraction process with less complicated wastewater treatment to minimize the production cost is the ultimate objective of our Auviola project. Bioleaching based on the cyanide-producing bacterium will be engineered, improving the gold extraction and subsequently degrading the off-process cyanide. The Auviola project utilized an engineered Chromobacterium violaceum. To optimize and design the system, kinetic and genomic scale models were demonstrated in both the extraction process and the cyanide degradation afterward. The bioreactor was also designed as the pilot scale for implementing the engineered gold bioleaching process. In the future, this project has the potential to be implemented as a sustainable low-cost gold bioleaching system for the artisanal and small-scale gold miners to bring achievable and beneficial impacts. Moreover, we also contribute to educating the students for understanding and implementing synthetic biology.

Background

Massive kills of fish caused by cyanide
Figure 1. Massive kills of fish caused by cyanide (source: youtu.be/wlYgYsbJhps&t=405s).

Gold is one of the noble metals which becomes a major economic driver for many countries. Its production requires a gold extraction step to obtain the pure ones from its orebody, for instance a leaching process that aims to separate the gold from other traces. Cyanide is one of these leaching agents that is widely used owing to the effective gold separation.1 However, cyanide waste can result in various harms in our environments, such as the decline of water quality and subsequently cause massive kills of aquatic organisms. Moreover, it also may threaten our health once it exposes our communities.

Up to 20% of the world’s gold comes from Artisanal and small-scale gold mining (ASGM), which is a gold mining community conducted by individuals or small enterprises with limited capital investment and production.2 ASGM becomes a big concern especially in Indonesia as it supports 1 million people’s livelihoods.3 Along with its high effectiveness, cyanide is widely utilized by ASGM as a leaching agent in the hydrometallurgical process.1

However, a study showed that the soil and plants nearby the ASGM has cyanide concentration higher than World and Health Organization (WHO) standard, indicating either the presence of cyanide leakage or improper waste treatment within the practices.4 In addition, a demand of 90 days-treatment of cyanide waste may increase the risk of leakage occurrence.1 Moreover, the limited performance of resources involved in ASGM perplexes people to achieve a proper cyanide waste treatment.5

Other alternatives that may be utilized by ASGM communities; i.e. pyrometallurgy and biohydrometallurgy. Pyrometallurgy as an alternative gold extraction method is unsuitable for ASGM as it needs huge energy sources for the 600oC-heating process.6 Therefore, another approach for gold extraction is needed to achieve a proper implementation among ASGM.

On the other hand, a biohydrometallurgy that involves organism in the gold extraction process becomes a promising alternative as it provides faster waste treatment due to the enzymatic process, resulting in a reduced risk of cyanide leakage. In addition, a bacterium Chromobacterium violaceum has been found to produce cyanide as well as degrade it, therefore may be developed into biohydrometallurgy to a simpler and more applicable leaching process as well as prevent improper waste treatment.7

Massive kills of fish caused by cyanide
Figure 2. Characteristics of Chromobacterium violaceum.

Approach

With the concepts of synthetic biology, we are developing Auviola–an engineered C. violaceum with an on-off system for cyanide regulation in the gold bioleaching process. Compared to the wild-type, the new C. violaceum is engineered to have more cyanide-regulating genes, resulting in a better gold dissolution and cyanide waste treatment. This engineered bacterium is designed to function in a bioreactor to create the bioleaching system on an industrial scale. Along with this genetic engineering, we hope that this project may help many ASGM communities to create the best yield of gold.

“This Auviola project engineers C. violaceum to have more cyanide-regulating genes, resulting in a better gold dissolution and cyanide waste treatment”

How does this idea come to us?

Indonesia is one of the biggest gold producing countries with more than one hundred tons production in 2020.8 Moreover, there are plenty of ASGM practices directly organized by more than 300,000 inhabitants in Indonesia to give additional incomes.9

The use of gold is not limited to jewelry as it also possesses a lot of financial, electrical, and medicinal purposes. Despite this digital era, gold is still persistent to be used as an investment. Gold is also widely used as a memory chip and conductor for electronics. As for now, gold is broadly developed as diagnostic tools, photothermal therapy agents, drug carriers, and other medicinal uses. Therefore, the development for an environmentally friendly bioleaching model may aid to the improvement of those gold utilizations.

According to plenty of gold producers, this Auviola project has the potential to be developed as a better system of bioleaching process, especially in the ASGM practices. Coming with the merits of gold, we wish that we may create a big impact in reducing cyanide leakage and improving proper cyanide waste treatment through utilizing Auviola within the communities.

References

  1. Kementerian Lingkungan Hidup dan Kehutanan, 2020, Teknologi Pengolahan Emas pada Pertambangan Emas Skala Kecil di Indonesia, GOLD-ISMIA, Jakarta.
  2. PlanetGOLD, 2021, ASGM 101: A Primer on Mercury Use in Artisanal and Small-Scale Gold Mining [Online] https://www.planetgold.org/asgm-101 [accessed on September 25th, 2021 13:35 WIT].
  3. PlanetGOLD, 2021, Indonesia: Phasing out mercury, protecting livelihoods [Online] https://www.planetgold.org/indonesia [accessed on September 25th, 2021 13:37 WIT].
  4. Suhadi, Sueb, Muliya, B.K., Ashoffi, A.M., 2021, Pollution of mercury and cyanide soils and plants in surrounding in the Artisanal and Small-Scale Gold Mining (ASGM) at Sekotong District, West Lombok, West Nusa Tenggara, Biological Environment and Pollution, vol 1, no 1, pp 30-37.
  5. WHO, 2016, Artisanal and small-scale gold mining and health, WHO, Geneva.
  6. Ojeda, M.W., Perino, E., Ruiz, M.C., 2009, Gold extraction by chlorination using a pyrometallurgical process, Minerals Engineering, vol 22, pp 409-411.
  7. Batista, J.H. & da Silva Neto, J.F., 2017, Chromobacterium violaceum Pathogenicity: Updates and Insights from Genome Sequencing of Novel Chromobacterium Species, Frontiers in Microbiology, vol 8, pp 1-7.
  8. Goldhub, 2021, Gold mine production [Online] https://www.gold.org/goldhub/data/historical-mine-production [accessed on July 10th, 2021 19:42 WIT].
  9. Kementerian Lingkungan Hidup dan Kehutanan, 2020, ​Pertambangan emas skala kecil (PESK): Tantangan dalam akses pembiayaan [Online] http://sib3pop.menlhk.go.id/index.php/articles/view?slug=pertambangan-emas-skala-kecil-pesk-tantangan-dalam-akses-pembiayaan [accessed on August 7th, 2021 22:34 WIT].

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