Difference between revisions of "Team:Shanghai Metropolis/Description"

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<div class="ev71-content">
 
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            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/TeamMembers">Team</a>
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                        <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Attributions">Attributions</a>
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                            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Attributions">Attributions</a>
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                        <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Collaboration">Collaboration</a>
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                            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Collaboration">Collaboration</a>
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                <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Modeling">Modeling</a>
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                <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Entrepreneurship">Entrepreneurship</a>
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        <!--Implementation-->
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        <!--Human Practice-->
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                        <a href="https://2021.igem.org/Team:Shanghai_Metropolis/HumanPractice">Integrated Human Practice</a>
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                            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/HumanPractice">Integrated Human Practice</a>
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                        <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Communication">Communication</a>
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                            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Communication">Communication</a>
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                        <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Fundrasing">Fundrasing</a>
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                            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Fundraising">Fundraising</a>
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                        </li>
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            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/PartsCollection">Parts</a>
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                        </li>
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                        <li class="child-item">
                        <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Engineering">Engineering</a>
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                            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Engineering">Engineering</a>
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                        </li>
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        <!--Project-->
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            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Description">Project</a>
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                <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Description">Project</a>
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                        <li class="child-item active">
                        <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Description">Description</a>
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                            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Description">Description</a>
                    </li>
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                        </li>
                    <li class="child-item">
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                         <li class="child-item">
                         <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Design">Design</a>
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                            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Experiments">Experiments</a>
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                        <li class="child-item">
                        <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Experiments">Experiments</a>
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                            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Result">Result</a>
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                    <li class="child-item">
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                        <li class="child-item">
                        <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Result">Result</a>
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                            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/ProofOfConcept">Proof of Concept</a>
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                        <a href="https://2021.igem.org/Team:Shanghai_Metropolis/ProofOfConcept">Proof of Concept</a>
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                            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Notebook">Notebook</a>
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                    <li class="child-item">
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                        <li class="child-item">
                        <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Notebook">Notebook</a>
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                            <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Safety">Safety</a>
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                    </ul>
                        <a href="https://2021.igem.org/Team:Shanghai_Metropolis/Safety">Safety</a>
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                </div>
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            </li>
                </ul>
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        <!--Home-->
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            <a href="https://2021.igem.org/Team:Shanghai_Metropolis">Home</a>
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                <a href="https://2021.igem.org/Team:Shanghai_Metropolis">Home</a>
        </li>
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<!--内容-->
 
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<div class="content-small">
 
<div class="content-small">
     <section class="article" style="padding-bottom: 30px">
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     <section class="article p-t-54 p-b-54">
         <h1 class="title">I.Background</h1>
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         <section>
        <img src="https://static.igem.org/mediawiki/2021/b/b6/T--Shanghai_Metropolis--img_desc_1.jpg" alt="" style="width: 100%; height: 100%;">
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            <h1 class="title">I.Background</h1>
        <h1 class="title blue">HFMD</h1>
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            <img src="https://static.igem.org/mediawiki/2021/b/b6/T--Shanghai_Metropolis--img_desc_1.jpg" alt="">
        <p>Hand, foot, and mouth disease (HFMD) is an infectious disease caused by enteroviruses. HFMD occurs in
+
            children under 5 years of age. It can cause herpes in the mouth, hands, and feet, or complications such as
+
            myocarditis and meningitis.</p>
+
        <p>From July to December in 1997, 11 previously healthy children in Peninsular Malaysia succumbed to an acute
+
            severe refractory leftventricular heart failure, following a brief prodromal illness characterized by fever
+
            (axillary temperature > 38 degrees C) (100%), oral ulcers (72%), extremity rashes (45%) and significant
+
            vomiting (55%); they were in the midst of an outbreak of hand, foot and mouth disease (HFMD). China has the
+
            largest number of patients of it (8:87% of the total number of nine foot diseases in 2014), with enterovirus
+
            71(EV71) as its main pathogenic agent. Hence, it is then highly urgent for people to think up a solution to
+
            control and forestall the infection of EV71.</p>
+
  
        <h1 class="title blue">Vaccine</h1>
+
            <h2 class="title2 blue">HFMD</h2>
        <p>The most effective way to deal with the high prevalence of HFMD caused by EV71 is vaccination. The mechanism
+
            <p>Hand, foot, and mouth disease (HFMD) is an infectious disease caused by enteroviruses. HFMD occurs in
            of the vaccine is to introduce viruses or parts of them to human bodies and to build up specific memory
+
                children under 5 years of age. It can cause herpes in the mouth, hands, and feet, or complications such as
            cells, in a word, immunity, for future virus infection.</p>
+
                myocarditis and meningitis.</p>
        <p>There are already various types of EV71 vaccines, including live attenuated viruses, inactivated whole
+
            <p>From July to December in 1997, 11 previously healthy children in Peninsular Malaysia succumbed to an acute
            viruses, VLPs, and recombinant protein subunits. Nonetheless, these injection-based vaccines are never
+
                severe refractory leftventricular heart failure, following a brief prodromal illness characterized by fever
            coming without their limitations--- relatively low coverage rate due to children’s fear of needles, high
+
                (axillary temperature > 38 degrees C) (100%), oral ulcers (72%), extremity rashes (45%) and significant
            consumption of time and labor due to requirements of injection, huge production of biohazardous waste, and
+
                vomiting (55%); they were in the midst of an outbreak of hand, foot and mouth disease (HFMD). China has the
            high incidence of side effects. There isneed to design safer, more convenient and more effective vaccine
+
                largest number of patients of it (8:87% of the total number of nine foot diseases in 2014), with enterovirus
            delivery methods to protect people, especially children, from unaddressed and emerging diseases.</p>
+
                71(EV71) as its main pathogenic agent. Hence, it is then highly urgent for people to think up a solution to
 +
                control and forestall the infection of EV71.</p>
  
        <h1 class="title">II.General Concept</h1>
+
            <h2 class="title2 blue">Vaccine</h2>
        <p>Vaccinations include injections (hepatitis B, BCG, and influenza, etc.) and oral vaccines (polio, cholera,
+
            <p>The most effective way to deal with the high prevalence of HFMD caused by EV71 is vaccination. The mechanism
            and rotavirus). Given the prevalent needle fears of children and a series of problems caused by injections,
+
                of the vaccine is to introduce viruses or parts of them to human bodies and to build up specific memory
            we select oral vaccine as the form of our EV71 vaccine.</p>
+
                cells, in a word, immunity, for future virus infection.</p>
        <p>Oral vaccine is self-administered, more acceptable to children, and biohazardous-waste-free; additionally,
+
            <p>There are already various types of EV71 vaccines, including live attenuated viruses, inactivated whole
            the oral route enables stimulation of humoral and cellular immune responses at both systemic and mucosal
+
                viruses, VLPs, and recombinant protein subunits. Nonetheless, these injection-based vaccines are never
            sites. It seems that oral EV71 vaccine can compensate for the limitations of traditional injection-based
+
                coming without their limitations--- relatively low coverage rate due to children’s fear of needles, high
            vaccine and provide people with a broader and long-lasting protection from HFMD.</p>
+
                consumption of time and labor due to requirements of injection, huge production of biohazardous waste, and
 +
                high incidence of side effects. There isneed to design safer, more convenient and more effective vaccine
 +
                delivery methods to protect people, especially children, from unaddressed and emerging diseases.</p>
 +
        </section>
  
         <h1 class="title blue">Lactobacillus casei</h1>
+
         <section>
        <p><i>Lactobacillus casei</i> is an important probiotic to maintain the stability of human intestinal flora. L.
+
            <h1 class="title">II.General Concept</h1>
            <i>casei</i> can tolerate the body's defense mechanisms, including enzymes in the mouth, low pH in gastric
+
            <p>Vaccinations include injections (hepatitis B, BCG, and influenza, etc.) and oral vaccines (polio, cholera,
            juices, and bile acids in the small intestine. Therefore, L. <i>casei</i> can survive in the intestinal
+
                and rotavirus). Given the prevalent needle fears of children and a series of problems caused by injections,
             tract in
+
                we select oral vaccine as the form of our EV71 vaccine.</p>
            large quantities after entering the human body, regulating the balance of intestinal flora, and promoting
+
             <p>Oral vaccine is self-administered, more acceptable to children, and biohazardous-waste-free; additionally,
            human digestion and absorption; it is an ideal expression vector for an oral live vaccine. Therefore, after
+
                the oral route enables stimulation of humoral and cellular immune responses at both systemic and mucosal
            we transform the plasmid into E. coli, we will also transform them into L. casei to express the target
+
                sites. It seems that oral EV71 vaccine can compensate for the limitations of traditional injection-based
            proteins.</p>
+
                vaccine and provide people with a broader and long-lasting protection from HFMD.</p>
  
        <h1 class="title blue">EV71 vaccine</h1>
+
            <h2 class="title2 blue">Lactobacillus casei</h2>
        <p><i>VP1</i> is the main antigenic gene of the EV71 virus, which can encode capsid protein and promote the
+
            <p><i>Lactobacillus casei</i> is an important probiotic to maintain the stability of human intestinal flora. L.
            invasion
+
                <i>casei</i> can tolerate the body's defense mechanisms, including enzymes in the mouth, low pH in gastric
            of virus particles into host cells (figure 1). Therefore, we selected VP1 as the target gene for the
+
                juices, and bile acids in the small intestine. Therefore, L. <i>casei</i> can survive in the intestinal
            development of the EV71 vaccine. The B-subunit of heat-labile enterotoxin (LT) in E. coli, called LTB, has
+
                tract in
            strong immunogenicity and adjuvant activity, and will not do harm to the human body. LTB and a variety of
+
                large quantities after entering the human body, regulating the balance of intestinal flora, and promoting
            unrelated proteins and their non-protein antigens can enhance the mucosal IgA and humoral IgG responses of
+
                human digestion and absorption; it is an ideal expression vector for an oral live vaccine. Therefore, after
            antigens through different immune pathways. In conclusion, we will combine VP1 and LTB in our vaccine.</p>
+
                we transform the plasmid into E. coli, we will also transform them into L. casei to express the target
        <div class="img-container">
+
                proteins.</p>
            <img src="https://static.igem.org/mediawiki/2021/4/4d/T--Shanghai_Metropolis--img_desc_2.jpg" alt="">
+
            <span>Figure-1 VP1 is the main antigen gene of EV71</span>
+
        </div>
+
        <p>We use subunit vaccine and adjuvant, VP1-LTB in this case since it includes the immunological part of EV71
+
            but does not confront people with the risk of counteractive effects, such as the virus particles returning
+
            back to active stages and infecting people.</p>
+
  
        <h1 class="title blue">Design</h1>
+
            <h2 class="title2 blue">EV71 vaccine</h2>
        <section class="p-bottom">
+
            <p><i>VP1</i> is the main antigenic gene of the EV71 virus, which can encode capsid protein and promote the
             <p>First of all, we will manipulate PCR on two types of plasmids: pUC57-VP1 and pUC57-LTB. After each PCR
+
                invasion
                process, we will manipulate electrophoresis on the samples that we have got, in order to examine if our
+
                of virus particles into host cells (figure 1). Therefore, we selected VP1 as the target gene for the
                PCR
+
                development of the EV71 vaccine. The B-subunit of heat-labile enterotoxin (LT) in E. coli, called LTB, has
                is successful and to extract the DNA fragments we want. Therefore, from the first step, we will obtain
+
                strong immunogenicity and adjuvant activity, and will not do harm to the human body. LTB and a variety of
                DNA
+
                unrelated proteins and their non-protein antigens can enhance the mucosal IgA and humoral IgG responses of
                fragments VP1, VP1-Lkr, and LTB. With the linker, we are able to manipulate overlap extension PCR (OE
+
                antigens through different immune pathways. In conclusion, we will combine VP1 and LTB in our vaccine.</p>
                PCR)
+
            <div class="img-container">
                to connect VP1-Lkr and LTB together to form VP1-LTB. After this, we will conduct enzyme digestion on
+
                <img src="https://static.igem.org/mediawiki/2021/4/4d/T--Shanghai_Metropolis--img_desc_2.jpg" alt="">
                VP1-LTB
+
                <span>Figure-1 VP1 is the main antigen gene of EV71</span>
                and VP1, which create sticky ends at both ends of these DNA fragments.</p>
+
            </div>
            <p>We will then carry out enzyme digestion on the plasmid pGEX-6P-1 to cut off the DNA fragment. Then, we
+
            <p>We use subunit vaccine and adjuvant, VP1-LTB in this case since it includes the immunological part of EV71
                will
+
                but does not confront people with the risk of counteractive effects, such as the virus particles returning
                ligate link VP1 and VP1-LTB fragments respectively with the plasmid pGEX-6P-1. Finally, we will get two
+
                back to active stages and infecting people.</p>
                plasmids: pGEX-6P-1-VP1 and pGEX-6P-1-VP1-LTB.</p>
+
 
            <p>Next, we will transform these two plasmids into chemically competent cells, E. coli DH5α, and allow these
+
            <h2 class="title2 blue">Design</h2>
                bacteria to grow and replicate. After this step, a massive number of plasmids pGEX-6P-1-VP1 and
+
             <section>
                pGEX-6P-1-VP1-LTB could be extracted from the bacteria. A small amount of this sample will be sent to
+
                <p>First of all, we will manipulate PCR on two types of plasmids: pUC57-VP1 and pUC57-LTB. After each PCR
                genetic sequencing agencies to test if the transformation of the plasmid has been successful. The rest
+
                    process, we will manipulate electrophoresis on the samples that we have got, in order to examine if our
                of
+
                    PCR
                the sample will be processed in another transformation process. pGEX-6P-1-VP1 and pGEX-6P-1-VP1-LTB will
+
                    is successful and to extract the DNA fragments we want. Therefore, from the first step, we will obtain
                be
+
                    DNA
                transformed into two other types of bacteria: E. coli BL21 and L. casei ATCC 334. Then, we will carry
+
                    fragments VP1, VP1-Lkr, and LTB. With the linker, we are able to manipulate overlap extension PCR (OE
                out
+
                    PCR)
                IPTG induction for E. coli BL21 and L. casei ATCC 334. After this, we will manipulate SDS-PAGE,
+
                    to connect VP1-Lkr and LTB together to form VP1-LTB. After this, we will conduct enzyme digestion on
                Coomassie
+
                    VP1-LTB
                brilliant blue staining, and Western blot to detect the expression of VP1 and VP1-LTB proteins.</p>
+
                    and VP1, which create sticky ends at both ends of these DNA fragments.</p>
            <p>All the above processes are shown in figures 2 and 3.</p>
+
                <p>We will then carry out enzyme digestion on the plasmid pGEX-6P-1 to cut off the DNA fragment. Then, we
 +
                    will
 +
                    ligate link VP1 and VP1-LTB fragments respectively with the plasmid pGEX-6P-1. Finally, we will get two
 +
                    plasmids: pGEX-6P-1-VP1 and pGEX-6P-1-VP1-LTB.</p>
 +
                <p>Next, we will transform these two plasmids into chemically competent cells, E. coli DH5α, and allow these
 +
                    bacteria to grow and replicate. After this step, a massive number of plasmids pGEX-6P-1-VP1 and
 +
                    pGEX-6P-1-VP1-LTB could be extracted from the bacteria. A small amount of this sample will be sent to
 +
                    genetic sequencing agencies to test if the transformation of the plasmid has been successful. The rest
 +
                    of
 +
                    the sample will be processed in another transformation process. pGEX-6P-1-VP1 and pGEX-6P-1-VP1-LTB will
 +
                    be
 +
                    transformed into two other types of bacteria: E. coli BL21 and L. casei ATCC 334. Then, we will carry
 +
                    out
 +
                    IPTG induction for E. coli BL21 and L. casei ATCC 334. After this, we will manipulate SDS-PAGE,
 +
                    Coomassie
 +
                    brilliant blue staining, and Western blot to detect the expression of VP1 and VP1-LTB proteins.</p>
 +
                <p>All the above processes are shown in figures 2 and 3.</p>
 +
            </section>
 +
            <div class="img-container">
 +
                <img src="https://static.igem.org/mediawiki/2021/7/72/T--Shanghai_Metropolis--img_desc_3.jpg" alt="" style="width: 80%">
 +
                <span>Figure-2 General concept of the experiments (1)</span>
 +
            </div>
 +
            <div class="img-container">
 +
                <img src="https://static.igem.org/mediawiki/2021/f/fe/T--Shanghai_Metropolis--img_desc_4.jpg" alt="" style="width: 80%">
 +
                <span>Figure-3 General concept of the experiments (2)</span>
 +
            </div>
 
         </section>
 
         </section>
        <div class="img-container">
 
            <img src="https://static.igem.org/mediawiki/2021/7/72/T--Shanghai_Metropolis--img_desc_3.jpg" alt="">
 
            <span>Figure-2 General concept of the experiments (1)</span>
 
        </div>
 
        <div class="img-container">
 
            <img src="https://static.igem.org/mediawiki/2021/f/fe/T--Shanghai_Metropolis--img_desc_4.jpg" alt="">
 
            <span>Figure-3 General concept of the experiments (2)</span>
 
        </div>
 
  
         <h1 class="title">III.Expected Result</h1>
+
         <section>
        <section class="p-bottom">
+
            <h1 class="title">III.Expected Result</h1>
            <p>1.The plasmid pGEX-6P-1-VP1 and pGEX-6P-1-VP1-LTB are successfully constructed, which are identified by
+
            <ol>
                enzyme double digestion and enzyme single digestion.</p>
+
                <li>
            <p>2.VP1 protein products with biological functions could be obtained from E. coli BL21 and L. casei ATCC
+
                    <p>The plasmid pGEX-6P-1-VP1 and pGEX-6P-1-VP1-LTB are successfully constructed, which are identified by enzyme double digestion and enzyme single digestion.</p>
                334.
+
                </li>
                SDS-PAGE, Coomassie brilliant blue staining, and Western blot analysis show that the protein has good
+
                <li>
                antigenicity.</p>
+
                    <p>VP1 protein products with biological functions could be obtained from E. coli BL21 and L. casei ATCC 334. SDS-PAGE, Coomassie brilliant blue staining, and Western blot analysis show that the protein has good antigenicity.</p>
            <p>3.We hope that our project could pave the way for a much safer, more convenient and efficient oral
+
                </li>
                vaccine
+
                <li>
                for children to defend against HFMD.</p>
+
                    <p>We hope that our project could pave the way for a much safer, more convenient and efficient oral vaccine for children to defend against HFMD.</p>
 +
                </li>
 +
            </ol>
 
         </section>
 
         </section>
  
 
         <h1 class="title">IV.Reference</h1>
 
         <h1 class="title">IV.Reference</h1>
         <section class="p-bottom">
+
         <section class="align-normal-all">
             <p>1.Buch MH, Liaci AM, O'Hara SD, Garcea RL, Neu U, Stehle T (October 2015). "Structural and Functional
+
             <ol>
                Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and
+
                <li>
                Pathogenicity". PLoS Pathogens. 11 (10): e1005104. doi:10.1371/journal.ppat.1005104</p>
+
                    <p>Buch MH, Liaci AM, O'Hara SD, Garcea RL, Neu U, Stehle T (October 2015). "Structural and
            <p>2.Ramqvist T, Dalianis T (August 2009). "Murine polyomavirus tumour specific transplantation antigens and
+
                        Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand
                viral persistence in relation to the immune response, and tumour development". Seminars in Cancer
+
                        Recognition and Pathogenicity". PLoS Pathogens. 11 (10): e1005104.
                Biology.
+
                        doi:10.1371/journal.ppat.1005104</p>
                19 (4): 236–43. doi:10.1016/j.semcancer.2009.02.001</p>
+
                </li>
            <p>3.Nassef, C., Ziemer, C., & Morrell, D. S. (2015). Hand-foot-and-mouth disease: a new look at a classic
+
                <li>
                viral
+
                    <p>Ramqvist T, Dalianis T (August 2009). "Murine polyomavirus tumour specific transplantation
                rash. Current opinion in pediatrics, 27(4), 486–491. https://doi.org/10.1097/MOP.0000000000000246</p>
+
                        antigens and viral persistence in relation to the immune response, and tumour development".
            <p>4.Who.int. 2021. How do vaccines work?. [online] Available at: &lt;https://www.who.int/news-room/feature-stories/detail/how-do-vaccines-work?gclid=EAIaIQobChMIn4OC7YOh8gIVsG1vBB0wYgcmEAAYAyAAEgIBFvD_BwE>
+
                        Seminars in Cancer Biology. 19 (4): 236–43. doi:10.1016/j.semcancer.2009.02.001</p>
                [Accessed 8 August 2021].
+
                </li>
            </p>
+
                <li>
            <p>5.Yee, Pinn & Poh, Chit. (2015). Development of Novel Vaccines against Enterovirus-71. Viruses. 8. 1.
+
                    <p>Nassef, C., Ziemer, C., & Morrell, D. S. (2015). Hand-foot-and-mouth disease: a new look at a
                10.3390/v8010001.</p>
+
                        classic viral rash. Current opinion in pediatrics, 27(4), 486–491.
            <p>6.Orlando, A.; Refolo, M. G.; Messa, C.; Amati, L.; Lavermicocca, P.; Guerra, V.; Russo, F. (October
+
                        https://doi.org/10.1097/MOP.0000000000000246</p>
                2012).
+
                </li>
                "Antiproliferative and Proapoptotic Effects of Viable or Heat-Killed IMPC2.1 and GG in HGC-27 Gastric
+
                <li>
                and
+
                    <p>Who.int. 2021. How do vaccines work?. [online] Available at: &lt;https://www.who.int/news-room/feature-stories/detail/how-do-vaccines-work?gclid=EAIaIQobChMIn4OC7YOh8gIVsG1vBB0wYgcmEAAYAyAAEgIBFvD_BwE>
                DLD-1 Colon Cell Lines". Nutrition and Cancer. 64 (7): 1103–1111. doi:10.1080/01635581.2012.717676</p>
+
                        [Accessed 8 August 2021].
 +
                    </p>
 +
                </li>
 +
                <li>
 +
                    <p>Yee, Pinn & Poh, Chit. (2015). Development of Novel Vaccines against Enterovirus-71. Viruses. 8.
 +
                        1. 10.3390/v8010001.</p>
 +
                </li>
 +
                <li>
 +
                    <p>Orlando, A.; Refolo, M. G.; Messa, C.; Amati, L.; Lavermicocca, P.; Guerra, V.; Russo, F.
 +
                        (October 2012). "Antiproliferative and Proapoptotic Effects of Viable or Heat-Killed IMPC2.1 and
 +
                        GG in HGC-27 Gastric and DLD-1 Colon Cell Lines". Nutrition and Cancer. 64 (7): 1103–1111.
 +
                        doi:10.1080/01635581.2012.717676</p>
 +
                </li>
 +
            </ol>
 +
 
 +
 
 
         </section>
 
         </section>
 
     </section>
 
     </section>

Revision as of 17:25, 11 September 2021

I.Background

HFMD

Hand, foot, and mouth disease (HFMD) is an infectious disease caused by enteroviruses. HFMD occurs in children under 5 years of age. It can cause herpes in the mouth, hands, and feet, or complications such as myocarditis and meningitis.

From July to December in 1997, 11 previously healthy children in Peninsular Malaysia succumbed to an acute severe refractory leftventricular heart failure, following a brief prodromal illness characterized by fever (axillary temperature > 38 degrees C) (100%), oral ulcers (72%), extremity rashes (45%) and significant vomiting (55%); they were in the midst of an outbreak of hand, foot and mouth disease (HFMD). China has the largest number of patients of it (8:87% of the total number of nine foot diseases in 2014), with enterovirus 71(EV71) as its main pathogenic agent. Hence, it is then highly urgent for people to think up a solution to control and forestall the infection of EV71.

Vaccine

The most effective way to deal with the high prevalence of HFMD caused by EV71 is vaccination. The mechanism of the vaccine is to introduce viruses or parts of them to human bodies and to build up specific memory cells, in a word, immunity, for future virus infection.

There are already various types of EV71 vaccines, including live attenuated viruses, inactivated whole viruses, VLPs, and recombinant protein subunits. Nonetheless, these injection-based vaccines are never coming without their limitations--- relatively low coverage rate due to children’s fear of needles, high consumption of time and labor due to requirements of injection, huge production of biohazardous waste, and high incidence of side effects. There isneed to design safer, more convenient and more effective vaccine delivery methods to protect people, especially children, from unaddressed and emerging diseases.

II.General Concept

Vaccinations include injections (hepatitis B, BCG, and influenza, etc.) and oral vaccines (polio, cholera, and rotavirus). Given the prevalent needle fears of children and a series of problems caused by injections, we select oral vaccine as the form of our EV71 vaccine.

Oral vaccine is self-administered, more acceptable to children, and biohazardous-waste-free; additionally, the oral route enables stimulation of humoral and cellular immune responses at both systemic and mucosal sites. It seems that oral EV71 vaccine can compensate for the limitations of traditional injection-based vaccine and provide people with a broader and long-lasting protection from HFMD.

Lactobacillus casei

Lactobacillus casei is an important probiotic to maintain the stability of human intestinal flora. L. casei can tolerate the body's defense mechanisms, including enzymes in the mouth, low pH in gastric juices, and bile acids in the small intestine. Therefore, L. casei can survive in the intestinal tract in large quantities after entering the human body, regulating the balance of intestinal flora, and promoting human digestion and absorption; it is an ideal expression vector for an oral live vaccine. Therefore, after we transform the plasmid into E. coli, we will also transform them into L. casei to express the target proteins.

EV71 vaccine

VP1 is the main antigenic gene of the EV71 virus, which can encode capsid protein and promote the invasion of virus particles into host cells (figure 1). Therefore, we selected VP1 as the target gene for the development of the EV71 vaccine. The B-subunit of heat-labile enterotoxin (LT) in E. coli, called LTB, has strong immunogenicity and adjuvant activity, and will not do harm to the human body. LTB and a variety of unrelated proteins and their non-protein antigens can enhance the mucosal IgA and humoral IgG responses of antigens through different immune pathways. In conclusion, we will combine VP1 and LTB in our vaccine.

Figure-1 VP1 is the main antigen gene of EV71

We use subunit vaccine and adjuvant, VP1-LTB in this case since it includes the immunological part of EV71 but does not confront people with the risk of counteractive effects, such as the virus particles returning back to active stages and infecting people.

Design

First of all, we will manipulate PCR on two types of plasmids: pUC57-VP1 and pUC57-LTB. After each PCR process, we will manipulate electrophoresis on the samples that we have got, in order to examine if our PCR is successful and to extract the DNA fragments we want. Therefore, from the first step, we will obtain DNA fragments VP1, VP1-Lkr, and LTB. With the linker, we are able to manipulate overlap extension PCR (OE PCR) to connect VP1-Lkr and LTB together to form VP1-LTB. After this, we will conduct enzyme digestion on VP1-LTB and VP1, which create sticky ends at both ends of these DNA fragments.

We will then carry out enzyme digestion on the plasmid pGEX-6P-1 to cut off the DNA fragment. Then, we will ligate link VP1 and VP1-LTB fragments respectively with the plasmid pGEX-6P-1. Finally, we will get two plasmids: pGEX-6P-1-VP1 and pGEX-6P-1-VP1-LTB.

Next, we will transform these two plasmids into chemically competent cells, E. coli DH5α, and allow these bacteria to grow and replicate. After this step, a massive number of plasmids pGEX-6P-1-VP1 and pGEX-6P-1-VP1-LTB could be extracted from the bacteria. A small amount of this sample will be sent to genetic sequencing agencies to test if the transformation of the plasmid has been successful. The rest of the sample will be processed in another transformation process. pGEX-6P-1-VP1 and pGEX-6P-1-VP1-LTB will be transformed into two other types of bacteria: E. coli BL21 and L. casei ATCC 334. Then, we will carry out IPTG induction for E. coli BL21 and L. casei ATCC 334. After this, we will manipulate SDS-PAGE, Coomassie brilliant blue staining, and Western blot to detect the expression of VP1 and VP1-LTB proteins.

All the above processes are shown in figures 2 and 3.

Figure-2 General concept of the experiments (1)
Figure-3 General concept of the experiments (2)

III.Expected Result

  1. The plasmid pGEX-6P-1-VP1 and pGEX-6P-1-VP1-LTB are successfully constructed, which are identified by enzyme double digestion and enzyme single digestion.

  2. VP1 protein products with biological functions could be obtained from E. coli BL21 and L. casei ATCC 334. SDS-PAGE, Coomassie brilliant blue staining, and Western blot analysis show that the protein has good antigenicity.

  3. We hope that our project could pave the way for a much safer, more convenient and efficient oral vaccine for children to defend against HFMD.

IV.Reference

  1. Buch MH, Liaci AM, O'Hara SD, Garcea RL, Neu U, Stehle T (October 2015). "Structural and Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and Pathogenicity". PLoS Pathogens. 11 (10): e1005104. doi:10.1371/journal.ppat.1005104

  2. Ramqvist T, Dalianis T (August 2009). "Murine polyomavirus tumour specific transplantation antigens and viral persistence in relation to the immune response, and tumour development". Seminars in Cancer Biology. 19 (4): 236–43. doi:10.1016/j.semcancer.2009.02.001

  3. Nassef, C., Ziemer, C., & Morrell, D. S. (2015). Hand-foot-and-mouth disease: a new look at a classic viral rash. Current opinion in pediatrics, 27(4), 486–491. https://doi.org/10.1097/MOP.0000000000000246

  4. Who.int. 2021. How do vaccines work?. [online] Available at: <https://www.who.int/news-room/feature-stories/detail/how-do-vaccines-work?gclid=EAIaIQobChMIn4OC7YOh8gIVsG1vBB0wYgcmEAAYAyAAEgIBFvD_BwE> [Accessed 8 August 2021].

  5. Yee, Pinn & Poh, Chit. (2015). Development of Novel Vaccines against Enterovirus-71. Viruses. 8. 1. 10.3390/v8010001.

  6. Orlando, A.; Refolo, M. G.; Messa, C.; Amati, L.; Lavermicocca, P.; Guerra, V.; Russo, F. (October 2012). "Antiproliferative and Proapoptotic Effects of Viable or Heat-Killed IMPC2.1 and GG in HGC-27 Gastric and DLD-1 Colon Cell Lines". Nutrition and Cancer. 64 (7): 1103–1111. doi:10.1080/01635581.2012.717676