Difference between revisions of "Team:XJTU-China/Description"

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         <div class="container row fixedBackground">
 
         <div class="container row fixedBackground">
 
             <div class="fixedBackgroundImg"
 
             <div class="fixedBackgroundImg"
                 style="background-image: url(https://static.igem.org/mediawiki/2021/f/fd/T--XJTU-China--bg.jpg);">
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                 style="background-image: url(https://static.igem.org/mediawiki/2021/6/64/T--XJTU-China--description-bg.jpg);">
 
             </div>
 
             </div>
 
             <div class="pageHeadline"><span>Description</span></div>
 
             <div class="pageHeadline"><span>Description</span></div>
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                     </nav>
 
                     </nav>
 
                 </div>
 
                 </div>
                 <div class="page xjtuText col-lg-8 col-12 justify-content-center">
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                 <div class="col-lg-8 col-12 page xjtuText">
 
                     <a class="anchor" id="projectDescription"></a>
 
                     <a class="anchor" id="projectDescription"></a>
                     <h1 class="mt-5">Project Description</h1>
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                     <h1>Project Description</h1>
 
                     <div class="row">
 
                     <div class="row">
 
                         <div class="col-12">
 
                         <div class="col-12">
 
                             <p class="float-right nav mt-3">See our<a
 
                             <p class="float-right nav mt-3">See our<a
 
                                     href="https://2021.igem.org/Team:XJTU-China#nav-PV">
 
                                     href="https://2021.igem.org/Team:XJTU-China#nav-PV">
                                     &nbsp;promotion video&nbsp;&nbsp;<span class="fa fa-video-camera"></span></a></p>
+
                                     &nbsp;promotion video&nbsp;&nbsp;<span class="fa fa-video-camera"></span></a>
 +
                            </p>
 
                         </div>
 
                         </div>
 
                     </div>
 
                     </div>
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                         With the rapid changing in nowadays society, we can easily noticed that the number of people
 
                         With the rapid changing in nowadays society, we can easily noticed that the number of people
 
                         having
 
                         having
                         problems about their mental health, like depression,anxiety and insomnia, is in an increasing
+
                         problems about their mental health, like depression,anxiety and insomnia, is in an
 +
                        increasing
 
                         trend.<sup><a href="#ref">1</a></sup> And according to several researches, mental health
 
                         trend.<sup><a href="#ref">1</a></sup> And according to several researches, mental health
 
                         problems closely related to many
 
                         problems closely related to many
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                         also poses great pressure to individual’s mental health, which is hard to neglect.<sup><a
 
                         also poses great pressure to individual’s mental health, which is hard to neglect.<sup><a
 
                                 href="#ref">4</a></sup> According to
 
                                 href="#ref">4</a></sup> According to
                         the surveys carried out in US, China and Europe, during the pandemic time, the ratio of people
+
                         the surveys carried out in US, China and Europe, during the pandemic time, the ratio of
                         suffering from depression, anxiety and insomnia of different degrees is a climbing trend.<sup><a
+
                        people
                                href="#ref">5,6</a></sup><br></p>
+
                         suffering from depression, anxiety and insomnia of different degrees is a climbing
 +
                        trend.<sup><a href="#ref">5,6</a></sup><br></p>
 
                     <div class="imgWrapper centerize mt-3">
 
                     <div class="imgWrapper centerize mt-3">
 
                         <img src="https://static.igem.org/mediawiki/2021/3/30/T--XJTU-China--Description-Fig1.jpeg"
 
                         <img src="https://static.igem.org/mediawiki/2021/3/30/T--XJTU-China--Description-Fig1.jpeg"
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                         biology to bring changes to people who suffer from mental health problems like depression,
 
                         biology to bring changes to people who suffer from mental health problems like depression,
 
                         anxiety
 
                         anxiety
                         and insomnia, in order to improve their life quality. Due to the regulation of quarantine and
+
                         and insomnia, in order to improve their life quality. Due to the regulation of quarantine
 +
                        and
 
                         reduction in going out, dealing with those mental health problems by making differences to
 
                         reduction in going out, dealing with those mental health problems by making differences to
 
                         people’s
 
                         people’s
                         diets can be more convenient and ensure their safety. Tryptophan, as an essential amino acids
+
                         diets can be more convenient and ensure their safety. Tryptophan, as an essential amino
 +
                        acids
 
                         for
 
                         for
 
                         human, also shows excellent potential in reducing depression and anxiety and promoting sleep
 
                         human, also shows excellent potential in reducing depression and anxiety and promoting sleep
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                         <img src="https://static.igem.org/mediawiki/2021/4/42/T--XJTU-China--Description-Fig2-1.jpeg"
 
                         <img src="https://static.igem.org/mediawiki/2021/4/42/T--XJTU-China--Description-Fig2-1.jpeg"
 
                             alt="Fig. 1" width="80%">
 
                             alt="Fig. 1" width="80%">
                         <span class="description"><i>McKee, Grace B.Perrin, Paul B. Alzueta, Elisabet.Caffarra, Sendy.
+
                         <span class="description"><i>McKee, Grace B.Perrin, Paul B. Alzueta, Elisabet.Caffarra,
                                 Ramos-Usuga, Daniela.Carlos Arango-Lasprilla, Juan.Baker, Fiona C. TI Sleeping when the
+
                                Sendy.
 +
                                 Ramos-Usuga, Daniela.Carlos Arango-Lasprilla, Juan.Baker, Fiona C. TI Sleeping when
 +
                                the
 
                                 world
 
                                 world
 
                                 locks down: Correlates of sleep health during the COVID-19 pandemic across 59
 
                                 locks down: Correlates of sleep health during the COVID-19 pandemic across 59
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                     <p class="mt-3">
 
                     <p class="mt-3">
 
                         We aimed at developing a domestic tryptophan milk producer using knowledge and technology of
 
                         We aimed at developing a domestic tryptophan milk producer using knowledge and technology of
                         synthetic biology. Synthetic biology enables us to make functional change to given mode bacteria
+
                         synthetic biology. Synthetic biology enables us to make functional change to given mode
                         and fulfill our goal. Equipped with those skills and knowledge, we choose DH5α to accept our
+
                        bacteria
                         designed plasmid, which gives it the ability to produce Tryptophan efficiently and controllable.
+
                         and fulfill our goal. Equipped with those skills and knowledge, we choose <i>E.coli</i>DH5α to accept our
                         The core design of our produce circuit is the use of Toogle-Switch, which is divided into two
+
                         designed plasmid, which gives it the ability to produce Tryptophan efficiently and
                         branches: growing pass and producing pass. And <i>E.coli</i>, responding to the concentration of
+
                        controllable.
 +
                         The core design of our produce circuit is the use of Toogle Switch, which is divided into
 +
                        two
 +
                         branches: growing pass and producing pass. And <i>E.coli</i>, responding to the
 +
                        concentration of
 
                         IPTG and
 
                         IPTG and
 
                         the change of temperature, is able to manipulate the ratio of energy and substance input to
 
                         the change of temperature, is able to manipulate the ratio of energy and substance input to
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                         two branches, then automatically change between these two statuses. The growing pass is
 
                         two branches, then automatically change between these two statuses. The growing pass is
 
                         constructed
 
                         constructed
                         with the key gene: <i>PykA</i> ,to maintain the regular growth of <i>E.coli</i>. And the
+
                         with the key gene: <i>pykA</i> ,to maintain the regular growth of <i>E.coli</i>. And the
 
                         producing circuit
 
                         producing circuit
                         contains three main genes: <i>aroG</i>, <i>TrpA</i> and <i>TrpB</i>. In this part, <i>aroG</i>
+
                         contains three main genes: <i>aroG</i>, <i>trpA</i> and <i>trpB</i>. In this part,
 +
                        <i>aroG</i>
 
                         is essential for the
 
                         is essential for the
 
                         distribution of energy and substance between growth and produce process. And considering the
 
                         distribution of energy and substance between growth and produce process. And considering the
 
                         metabolic pressure for <i>E.coli</i> itself, we finally choose to link two main genes in the
 
                         metabolic pressure for <i>E.coli</i> itself, we finally choose to link two main genes in the
 
                         produce
 
                         produce
                         process of Tryptophan.<sup><a href="#ref">11</a></sup><br></p>
+
                         process of Tryptophan.<sup><a href="#ref">11</a></sup><br>
 +
                    </p>
 
                     <div class="imgWrapper centerize mt-3">
 
                     <div class="imgWrapper centerize mt-3">
 
                         <img src="https://static.igem.org/mediawiki/2021/1/1a/T--XJTU-China--Description-Fig3-ver2.png"
 
                         <img src="https://static.igem.org/mediawiki/2021/1/1a/T--XJTU-China--Description-Fig3-ver2.png"
                             alt="Fig. 1" width="70%">
+
                             alt="Fig. 1" width="90%">
 
                     </div>
 
                     </div>
 
                     <p class="mt-3">
 
                     <p class="mt-3">
                         On top of that, we design the hardware to help us achieve the goal of domestic produce and use
+
                         On top of that, we design the hardware to help us achieve the goal of domestic produce and
 +
                        use
 
                         of
 
                         of
                         Tryptophan. The design of our hardware can be divided into four key parts: temperature control
+
                         Tryptophan. The design of our hardware can be divided into four key parts: temperature
                         module, Single Chip Microcomputer, detecting module and magnetic stirring module. We are trying
+
                        control
                         to centralize all of these modules in a machine as small as possible, which gives our device the
+
                         module, Single Chip Microcomputer, detecting module and magnetic stirring module. We are
 +
                        trying
 +
                         to centralize all of these modules in a machine as small as possible, which gives our device
 +
                        the
 
                         advantage of being portable and convenient.<br></p>
 
                         advantage of being portable and convenient.<br></p>
 
                     <p>
 
                     <p>
 
                         IGEM competition is absolutely not the culmination of our exploration! During the precious
 
                         IGEM competition is absolutely not the culmination of our exploration! During the precious
 
                         journey
 
                         journey
                         in iGEM, we have endeavored to arouse public’s attention to their own mental health situation
+
                         in iGEM, we have endeavored to arouse public’s attention to their own mental health
 +
                        situation
 
                         and
 
                         and
                         aid people release their pain of depression, anxiety and insomnia. And after the competition, we
+
                         aid people release their pain of depression, anxiety and insomnia. And after the
                         will want to practice some innovative ideas we came up with at brain-storm stage, like how to
+
                        competition, we
 +
                         will want to practice some innovative ideas we came up with at brain-storm stage, like how
 +
                        to
 
                         polish and improve our hardware design to make it be widely accepted? How to use commercial
 
                         polish and improve our hardware design to make it be widely accepted? How to use commercial
                         strategies to advertise it. We really want our design to come down to earth with the purpose of
+
                         strategies to advertise it. We really want our design to come down to earth with the purpose
 +
                        of
 
                         releasing pain of people suffering from depression and bringing real convenience to public’s
 
                         releasing pain of people suffering from depression and bringing real convenience to public’s
 
                         daily
 
                         daily
                         life , anxiety and insomnia during this special. Fortunately, we are on our way to achieve that
+
                         life , anxiety and insomnia during this special. Fortunately, we are on our way to achieve
 +
                        that
 
                         goal.<br></p>
 
                         goal.<br></p>
  
Line 165: Line 187:
 
                         1&emsp;Merikangas, K. R. <i>et al</i>. Lifetime Prevalence of Mental Disorders in U.S.
 
                         1&emsp;Merikangas, K. R. <i>et al</i>. Lifetime Prevalence of Mental Disorders in U.S.
 
                         Adolescents: Results
 
                         Adolescents: Results
                         from the National Comorbidity Survey Replication–Adolescent Supplement (NCS-A). <i>Journal of
+
                         from the National Comorbidity Survey Replication–Adolescent Supplement (NCS-A). <i>Journal
 +
                            of
 
                             the
 
                             the
 
                             American Academy of Child & Adolescent Psychiatry</i> <b>49</b> (2010).<br>
 
                             American Academy of Child & Adolescent Psychiatry</i> <b>49</b> (2010).<br>
Line 171: Line 194:
 
                         Circadian
 
                         Circadian
 
                         Disorders. <i>Current Diabetes Reports</i> <b>14</b> (2014).<br>
 
                         Disorders. <i>Current Diabetes Reports</i> <b>14</b> (2014).<br>
                         3&emsp;ALFANO, C. A., GINSBURG, G. S. & KINGERY, J. N. Sleep-Related Problems Among Children and
+
                         3&emsp;ALFANO, C. A., GINSBURG, G. S. & KINGERY, J. N. Sleep-Related Problems Among Children
 +
                        and
 
                         Adolescents With Anxiety Disorders. <i>Journal of the American Academy of Child & Adolescent
 
                         Adolescents With Anxiety Disorders. <i>Journal of the American Academy of Child & Adolescent
 
                             Psychiatry</i> <b>46</b> (2007).<br>
 
                             Psychiatry</i> <b>46</b> (2007).<br>
 
                         4&emsp;Robert, S. <i>et al</i>. Depression, Anxiety and Stress during COVID-19: Associations
 
                         4&emsp;Robert, S. <i>et al</i>. Depression, Anxiety and Stress during COVID-19: Associations
 
                         with Changes in
 
                         with Changes in
                         Physical Activity, Sleep, Tobacco and Alcohol Use in Australian Adults. <i>International journal
+
                         Physical Activity, Sleep, Tobacco and Alcohol Use in Australian Adults. <i>International
 +
                            journal
 
                             of environmental research and public health</i> <b>17</b> (2020).<br>
 
                             of environmental research and public health</i> <b>17</b> (2020).<br>
 
                         5&emsp;D.S., K. W., A., C. S., C., T. E., A., L. D. & S., D. N. Loneliness during the first
 
                         5&emsp;D.S., K. W., A., C. S., C., T. E., A., L. D. & S., D. N. Loneliness during the first
 
                         half-year
 
                         half-year
 
                         of COVID-19 Lockdowns. <i>Psychiatry Research</i> <b>294</b> (2020)<br>
 
                         of COVID-19 Lockdowns. <i>Psychiatry Research</i> <b>294</b> (2020)<br>
                         6&emsp;Killgore, W. D. S., Cloonan, S. A., Taylor, E. C. & Dailey, N. S. Loneliness: A signature
+
                         6&emsp;Killgore, W. D. S., Cloonan, S. A., Taylor, E. C. & Dailey, N. S. Loneliness: A
                         mental health concern in the era of COVID-19. <i>Psychiatry Research</i> <b>290</b> (2020).<br>
+
                        signature
 +
                         mental health concern in the era of COVID-19. <i>Psychiatry Research</i> <b>290</b>
 +
                        (2020).<br>
 
                         7&emsp;Dalfsen, J. H. v. & Markus, C. R. The serotonin transporter gene-linked polymorphic
 
                         7&emsp;Dalfsen, J. H. v. & Markus, C. R. The serotonin transporter gene-linked polymorphic
 
                         region
 
                         region
 
                         (5-HTTLPR) and the sleep-promoting effects of tryptophan: A randomized placebo-controlled
 
                         (5-HTTLPR) and the sleep-promoting effects of tryptophan: A randomized placebo-controlled
 
                         crossover study. <i>Journal of Psychopharmacology</i> <b>33</b> (2019).<br>
 
                         crossover study. <i>Journal of Psychopharmacology</i> <b>33</b> (2019).<br>
                         8&emsp;Hudson, Hudson, Hecht & MacKenzie. Protein source tryptophan versus pharmaceutical grade
+
                         8&emsp;Hudson, Hudson, Hecht & MacKenzie. Protein source tryptophan versus pharmaceutical
 +
                        grade
 
                         tryptophan as an efficacious treatment for chronic insomnia. <i>Nutritional Neuroscience</i>
 
                         tryptophan as an efficacious treatment for chronic insomnia. <i>Nutritional Neuroscience</i>
 
                         <b>8</b>
 
                         <b>8</b>
Line 193: Line 221:
 
                         9&emsp;R, L. H., Sanjiv, A. & L, F. V. Tryptophan Intake in the US Adult Population Is Not
 
                         9&emsp;R, L. H., Sanjiv, A. & L, F. V. Tryptophan Intake in the US Adult Population Is Not
 
                         Related to
 
                         Related to
                         Liver or Kidney Function but Is Associated with Depression and Sleep Outcomes. <i>The Journal of
+
                         Liver or Kidney Function but Is Associated with Depression and Sleep Outcomes. <i>The
 +
                            Journal of
 
                             nutrition</i> <b>146</b> (2016).<br>
 
                             nutrition</i> <b>146</b> (2016).<br>
                         10&emsp;Schneider-Helmert, D. & Spinweber, C. L. Evaluation of l -tryptophan for treatment of
+
                         10&emsp;Schneider-Helmert, D. & Spinweber, C. L. Evaluation of l -tryptophan for treatment
 +
                        of
 
                         insomnia:
 
                         insomnia:
 
                         A review. <i>Psychopharmacology</i> <b>89</b> (1986).<br>
 
                         A review. <i>Psychopharmacology</i> <b>89</b> (1986).<br>
                         11&emsp;HAO Dali <i>et al</i>. Site-mutation of AroG Gene and Co-expression with TrpBA Gene in
+
                         11&emsp;HAO Dali <i>et al</i>. Site-mutation of AroG Gene and Co-expression with TrpBA Gene
 +
                        in
 
                         Escherichia coli. <i>Chinese Journal of Applied and Environmental Biology </i> <b>19</b>,
 
                         Escherichia coli. <i>Chinese Journal of Applied and Environmental Biology </i> <b>19</b>,
 
                         817-821 (2013).
 
                         817-821 (2013).

Latest revision as of 18:44, 21 October 2021

Team:XJTU-China/Project

Description

Project Description

We must admit that a nice mental state plays an essential role in maintaining our overall health. With the rapid changing in nowadays society, we can easily noticed that the number of people having problems about their mental health, like depression,anxiety and insomnia, is in an increasing trend.1 And according to several researches, mental health problems closely related to many physical disease, like high blood pressure and metabolic disease.2,3 What’s worse, this trend is developing tremendously during the pandemic prevailing of COVID-19.

COVID-19, occurred at the end of 2019, not only made profound influence on the economy of society, structure of industry and people’s lifestyle, but also posed a great threat to human health. Apart from directly causing damage to human body,like pneumonia and multiple organs injury, coronavirus also poses great pressure to individual’s mental health, which is hard to neglect.4 According to the surveys carried out in US, China and Europe, during the pandemic time, the ratio of people suffering from depression, anxiety and insomnia of different degrees is a climbing trend.5,6

Fig. 1

As a result, in this year’s iGEM competition, XJTU-China decides to use the technology of synthetic biology to bring changes to people who suffer from mental health problems like depression, anxiety and insomnia, in order to improve their life quality. Due to the regulation of quarantine and reduction in going out, dealing with those mental health problems by making differences to people’s diets can be more convenient and ensure their safety. Tryptophan, as an essential amino acids for human, also shows excellent potential in reducing depression and anxiety and promoting sleep quality.7,8,9,10 After having sufficient investigation and profound discussion with experts in nutriology, we decide to create a healthy type of milk based on tryptophan

Fig. 1 McKee, Grace B.Perrin, Paul B. Alzueta, Elisabet.Caffarra, Sendy. Ramos-Usuga, Daniela.Carlos Arango-Lasprilla, Juan.Baker, Fiona C. TI Sleeping when the world locks down: Correlates of sleep health during the COVID-19 pandemic across 59 countriesSO SLEEP HEALTH RI ; Perrin, Paul/L-5373-2015

We aimed at developing a domestic tryptophan milk producer using knowledge and technology of synthetic biology. Synthetic biology enables us to make functional change to given mode bacteria and fulfill our goal. Equipped with those skills and knowledge, we choose E.coliDH5α to accept our designed plasmid, which gives it the ability to produce Tryptophan efficiently and controllable. The core design of our produce circuit is the use of Toogle Switch, which is divided into two branches: growing pass and producing pass. And E.coli, responding to the concentration of IPTG and the change of temperature, is able to manipulate the ratio of energy and substance input to these two branches, then automatically change between these two statuses. The growing pass is constructed with the key gene: pykA ,to maintain the regular growth of E.coli. And the producing circuit contains three main genes: aroG, trpA and trpB. In this part, aroG is essential for the distribution of energy and substance between growth and produce process. And considering the metabolic pressure for E.coli itself, we finally choose to link two main genes in the produce process of Tryptophan.11

Fig. 1

On top of that, we design the hardware to help us achieve the goal of domestic produce and use of Tryptophan. The design of our hardware can be divided into four key parts: temperature control module, Single Chip Microcomputer, detecting module and magnetic stirring module. We are trying to centralize all of these modules in a machine as small as possible, which gives our device the advantage of being portable and convenient.

IGEM competition is absolutely not the culmination of our exploration! During the precious journey in iGEM, we have endeavored to arouse public’s attention to their own mental health situation and aid people release their pain of depression, anxiety and insomnia. And after the competition, we will want to practice some innovative ideas we came up with at brain-storm stage, like how to polish and improve our hardware design to make it be widely accepted? How to use commercial strategies to advertise it. We really want our design to come down to earth with the purpose of releasing pain of people suffering from depression and bringing real convenience to public’s daily life , anxiety and insomnia during this special. Fortunately, we are on our way to achieve that goal.


References

1 Merikangas, K. R. et al. Lifetime Prevalence of Mental Disorders in U.S. Adolescents: Results from the National Comorbidity Survey Replication–Adolescent Supplement (NCS-A). Journal of the American Academy of Child & Adolescent Psychiatry 49 (2010).
2 Depner, C. M., Stothard, E. R. & Wright, K. P. Metabolic Consequences of Sleep and Circadian Disorders. Current Diabetes Reports 14 (2014).
3 ALFANO, C. A., GINSBURG, G. S. & KINGERY, J. N. Sleep-Related Problems Among Children and Adolescents With Anxiety Disorders. Journal of the American Academy of Child & Adolescent Psychiatry 46 (2007).
4 Robert, S. et al. Depression, Anxiety and Stress during COVID-19: Associations with Changes in Physical Activity, Sleep, Tobacco and Alcohol Use in Australian Adults. International journal of environmental research and public health 17 (2020).
5 D.S., K. W., A., C. S., C., T. E., A., L. D. & S., D. N. Loneliness during the first half-year of COVID-19 Lockdowns. Psychiatry Research 294 (2020)
6 Killgore, W. D. S., Cloonan, S. A., Taylor, E. C. & Dailey, N. S. Loneliness: A signature mental health concern in the era of COVID-19. Psychiatry Research 290 (2020).
7 Dalfsen, J. H. v. & Markus, C. R. The serotonin transporter gene-linked polymorphic region (5-HTTLPR) and the sleep-promoting effects of tryptophan: A randomized placebo-controlled crossover study. Journal of Psychopharmacology 33 (2019).
8 Hudson, Hudson, Hecht & MacKenzie. Protein source tryptophan versus pharmaceutical grade tryptophan as an efficacious treatment for chronic insomnia. Nutritional Neuroscience 8 (2005).
9 R, L. H., Sanjiv, A. & L, F. V. Tryptophan Intake in the US Adult Population Is Not Related to Liver or Kidney Function but Is Associated with Depression and Sleep Outcomes. The Journal of nutrition 146 (2016).
10 Schneider-Helmert, D. & Spinweber, C. L. Evaluation of l -tryptophan for treatment of insomnia: A review. Psychopharmacology 89 (1986).
11 HAO Dali et al. Site-mutation of AroG Gene and Co-expression with TrpBA Gene in Escherichia coli. Chinese Journal of Applied and Environmental Biology 19, 817-821 (2013).

contact us

Xi'an Jiaotong University
28 Xianning West Road
Xi'an, Shaanxi, China, 710049
xjtu_igem@xjtu.edu.cn

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