Difference between revisions of "Team:SUNY Oneonta/Hardware Repo"

 
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<!-- # TODO: #6 Fix table caption font--><!-- # TODO: #7 Fix citations links font size--><html lang="en"><head><meta charset="utf-8"/><meta content="width=device-width,initial-scale=1" name="viewport"/><title>Hardware Registry | iGEM SUNY_Oneonta</title><script src="https://2020.igem.org/common/MathJax-2.5-latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script><link href="https://2021.igem.org/Template:SUNY_Oneonta/css/contentCSS?action=raw&amp;ctype=text/css" rel="stylesheet"/></head><body><!-- # TODO: #6 Fix table caption font--><!-- # TODO: #7 Fix citations links font size--><nav class="navbar navbar-expand-xl fixed-top"><div class="container d-flex justify-content-between"><a class="navbar-brand d-lg-inline-block" href="https://2021.igem.org/Team:SUNY_Oneonta"><h2>SNflaPs</h2></a><button aria-controls="navbarNav" aria-expanded="false" aria-label="Toggle navigation" class="navbar-toggler" data-target="#navbarNav" data-toggle="collapse" type="button"><span class="navbar-toggler-icon"></span></button><div class="collapse navbar-collapse" id="navbarNav"><ul class="navbar-nav ml-auto"><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarProject InspirationDropdown" role="button">Project Inspiration</a><div aria-labelledby="navbarProject InspirationDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Inspiration">Inspiration</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Promo_Video">Promotional Video</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Presentation">Presentation</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarProjectDropdown" role="button">Project</a><div aria-labelledby="navbarProjectDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Description">Overview</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Sample_Prep">Sample Preparation</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Detection">Detection</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Model">Modeling</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Proof_Of_Concept">Proof-of-Concept</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarHardware/SoftwareDropdown" role="button">Hardware/Software</a><div aria-labelledby="navbarHardware/SoftwareDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Hardware">Hardware</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Fluorimeter">Fluorimeter</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Heat_Block">Heat Block</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarJudgingDropdown" role="button">Judging</a><div aria-labelledby="navbarJudgingDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Part_Collection">Parts</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Implementation">Implementation</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Engineering">Engineering</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Contribution">Contributions</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Judging">Medal Criteria</a></div></li><li class="nav-item dropdown"><a 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href="https://2021.igem.org/Team:SUNY_Oneonta/Attributions">Attributions</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Sponsors">Sponsors</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarLab NotebookDropdown" role="button">Lab Notebook</a><div aria-labelledby="navbarLab NotebookDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Protocols">Protocols</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Daily_Log">Daily Log</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Safety">Safety</a></div></li></ul></div></div></nav><header class="d-flex justify-content-center align-items-center"><div class="container"><h1>Hardware Registry</h1><p class="lead pl-1"></p><hr class="my-4"/></div></header><main><div class="container"><div class="row"><div class="sidebar col-lg-3"><div class="nav" id="contents"><h5>Contents</h5><ul></ul></div></div><div class="content col-lg-9"><article><h1>Assessing Interest in Creation of an iGEM Hardware Registry</h1><p>In our two years competing in iGEM, we have attempted to research various hardware items produced by other teams throughout the years of the competition. We intended on using the designs of other teams as a starting point for creating our own devices, much in the way teams use parts created by other teams to create biological circuits.</p><p>Through our efforts, we have come to find it unnecessarily difficult to locate, digest, and effectively utilize data that pertains to hardware devices. This difficulty is due to the lack of a central location housing device designs, forcing teams to search through individual wiki pages. The work is complicated by the lack of a search engine that can filter devices by name or type, and a lack of standardization when it comes to information about devices being distributed.</p><p>Given that iGEM has a Parts Registry for <strong>Biological</strong> Parts and Devices, we set out to investigate the usefulness of a similar registry for <strong>Hardware</strong> devices. Our goal was to gauge if the iGEM community has interest in such a registry, parameters of such a registry, and what types of standardized information should be included in this registry. We hope that such information might inspire the creation of a registry prototype on the iGEM server for use in upcoming competition cycles.</p><p>The survey that we designed initially contained 7 questions. We invited iGEM teams to participate in the survey through the 2021 iGEM Collaboration’s web page, directly emailing teams we have collaborated with on other projects, and through social media. As of 10/14/2021 15 teams logged answers to survey questions. We should note here that it is likely that more teams attempted to take our survey than were logged. The reason for this is that we accidentally misset conditions on one of the questions. This mistake led to teams that indicated that that they were not building a hardware device for the 2021 competition to be closed out of the survey. When we discovered the mistake, we removed this question to permit all teams to access the survey questions.</p><h1>Survey Results</h1><p>Question 1: How many years has your team competed in iGEM?</p><div class="image"><img alt=" " src="https://static.igem.org/mediawiki/2021/f/fc/T--SUNY_Oneonta--img--SUR-01.png" style="width: 95%"/></div><p>Question 2: Would a Hardware repository be useful to your team?</p><div class="image"><img alt=" " src="https://static.igem.org/mediawiki/2021/a/a4/T--SUNY_Oneonta--img--SUR-02.png" style="width: 95%"/></div><p>Question 3: Question 3: If you answered yes or maybe to the previous question, should entering data be a competition requirement or on a voluntary basis?</p><div class="image"><img alt=" " src="https://static.igem.org/mediawiki/2021/b/b4/T--SUNY_Oneonta--img--SUR-03.png" style="width: 95%"/></div><p>Question 4: Ranked choice - What should a Hardware Repository be named?</p><div class="image"><img alt=" " src="https://static.igem.org/mediawiki/2021/6/68/T--SUNY_Oneonta--img--SUR-04.png" style="width: 95%"/></div><p>Question 5: Choose all that apply, and rank the importance - What fields should be included in a Hardware Repository?</p><div class="image"><img alt=" " src="https://static.igem.org/mediawiki/2021/2/22/T--SUNY_Oneonta--img--SUR-05.png" style="width: 95%"/></div><p>Question 6: Ranked choice – Rank the importance of each field that might be included in a Hardware Repository.</p><div class="image"><img alt=" " src="https://static.igem.org/mediawiki/2021/c/ca/T--SUNY_Oneonta--img--SUR-06.png" style="width: 95%"/></div><p>Participants were also provided a free response section to include any additional comments. No responses were logged.</p><h1>Conclusions regarding interest in a Hardware Repository</h1><p>From the results of our survey, most of the teams that participated in the survey are interested in the development of a Hardware Repository and might make use of this tool. The majority of participants believe that participation in such a database should be voluntary. When it comes to the build of such a Repository, most teams favored calling it a Hardware or Instrumentation Registry. Teams generally agree that this should contain information on device description, schematic diagrams, links to corresponding wiki pages and attribution to the teams that designed the device, device features and characterization data, along with references. Teams generally ranked these items in the importance that is ordered.</p><p>Through conducting this survey, our team has concluded that a standardized repository of hardware devices is a tool that is favored by the iGEM community. We will be transmitting the results of this survey to iGEM HQ, with the hopes that they will begin development on this useful tool.</p></article></div></div></div></main><footer><div class="container"><p>Email: <a href="mailto:igem@oneonta.edu">iGEM@oneonta.edu</a> | <a href="https://suny.oneonta.edu/igem">suny.oneonta.edu/iGEM</a></p></div></footer><script src="https://2021.igem.org/Template:SUNY_Oneonta/content-bundleJS?action=raw&amp;ctype=text/javascript"></script></body></html>
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<!-- # TODO: #6 Fix table caption font--><!-- # TODO: #7 Fix citations links font size--><html lang="en"><head><meta charset="utf-8"/><meta content="width=device-width,initial-scale=1" name="viewport"/><title>Hardware Registry | iGEM SUNY_Oneonta</title><script src="https://2020.igem.org/common/MathJax-2.5-latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script><link href="https://2021.igem.org/Template:SUNY_Oneonta/css/contentCSS?action=raw&amp;ctype=text/css" rel="stylesheet"/></head><body><!-- # TODO: #6 Fix table caption font--><!-- # TODO: #7 Fix citations links font size--><nav class="navbar navbar-expand-xl fixed-top"><div class="container d-flex justify-content-between"><a class="navbar-brand d-lg-inline-block" href="https://2021.igem.org/Team:SUNY_Oneonta"><h2>SNflaPs</h2></a><button aria-controls="navbarNav" aria-expanded="false" aria-label="Toggle navigation" class="navbar-toggler" data-target="#navbarNav" data-toggle="collapse" type="button"><span 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class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Description">Overview</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Sample_Prep">Sample Preparation</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Detection">Detection</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Model">Modeling</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Proof_Of_Concept">Proof-of-Concept</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarHardware/SoftwareDropdown" role="button">Hardware/Software</a><div aria-labelledby="navbarHardware/SoftwareDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Hardware">Hardware</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Fluorimeter">Fluorimeter</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Heat_Block">Heat Block</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarJudgingDropdown" role="button">Judging</a><div aria-labelledby="navbarJudgingDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Part_Collection">Parts</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Implementation">Implementation</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Engineering">Engineering</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Contribution">Contributions</a><a class="dropdown-item" href="https://2021.igem.org/Team:SUNY_Oneonta/Judging">Medal Criteria</a></div></li><li class="nav-item dropdown"><a 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class="sidebar col-lg-3"><div class="nav" id="contents"><h5>Contents</h5><ul></ul></div></div><div class="content col-lg-9"><article><h1>Assessing Interest in Creation of an iGEM Hardware Registry</h1><p>In our two years competing in iGEM, we have attempted to research various hardware items produced by other teams throughout the years of the competition. We intended on using the designs of other teams as a starting point for creating our own devices, much in the way teams use parts created by other teams to create biological circuits.</p><p>Through our efforts, we have come to find it unnecessarily difficult to locate, digest, and effectively utilize data that pertains to hardware devices. This difficulty is due to the lack of a central location housing device designs, forcing teams to search through individual wiki pages. The work is complicated by the lack of a search engine that can filter devices by name or type, and a lack of standardization when it comes to information about devices being distributed.</p><p>Given that iGEM has a Parts Registry for <strong>Biological</strong> Parts and Devices, we set out to investigate the usefulness of a similar registry for <strong>Hardware</strong> devices. Our goal was to gauge if the iGEM community has interest in such a registry, parameters of such a registry, and what types of standardized information should be included in this registry. We hope that such information might inspire the creation of a registry prototype on the iGEM server for use in upcoming competition cycles.</p><p>The survey that we designed initially contained 7 questions. We invited iGEM teams to participate in the survey through the 2021 iGEM Collaboration’s web page, directly emailing teams we have collaborated with on other projects, and through social media. As of 10/14/2021 15 teams logged answers to survey questions. We should note here that it is likely that more teams attempted to take our survey than were logged. The reason for this is that we accidentally misset conditions on one of the questions. This mistake led to teams that indicated that that they were not building a hardware device for the 2021 competition to be closed out of the survey. When we discovered the mistake, we removed this question to permit all teams to access the survey questions.</p><h1>Survey Results</h1><p>Question 1: How many years has your team competed in iGEM?</p><div class="image"><img alt=" " src="https://static.igem.org/mediawiki/2021/f/fc/T--SUNY_Oneonta--img--SUR-01.png" style="width: 95%"/></div><p>Question 2: Would a Hardware repository be useful to your team?</p><div class="image"><img alt=" " src="https://static.igem.org/mediawiki/2021/a/a4/T--SUNY_Oneonta--img--SUR-02.png" style="width: 95%"/></div><p>Question 3: Question 3: If you answered yes or maybe to the previous question, should entering data be a competition requirement or on a voluntary basis?</p><div class="image"><img alt=" " src="https://static.igem.org/mediawiki/2021/b/b4/T--SUNY_Oneonta--img--SUR-03.png" style="width: 95%"/></div><p>Question 4: Ranked choice - What should a Hardware Repository be named?</p><div class="image"><img alt=" " src="https://static.igem.org/mediawiki/2021/6/68/T--SUNY_Oneonta--img--SUR-04.png" style="width: 95%"/></div><p>Question 5: Choose all that apply, and rank the importance - What fields should be included in a Hardware Repository?</p><div class="image"><img alt=" " src="https://static.igem.org/mediawiki/2021/2/22/T--SUNY_Oneonta--img--SUR-05.png" style="width: 95%"/></div><p>Question 6: Ranked choice – Rank the importance of each field that might be included in a Hardware Repository.</p><div class="image"><img alt=" " src="https://static.igem.org/mediawiki/2021/c/ca/T--SUNY_Oneonta--img--SUR-06.png" style="width: 95%"/></div><p>Participants were also provided a free response section to include any additional comments. No responses were logged.</p><h1>Conclusions regarding interest in a Hardware Repository</h1><p>From the results of our survey, most of the teams that participated in the survey are interested in the development of a Hardware Repository and might make use of this tool. The majority of participants believe that participation in such a database should be voluntary. When it comes to the build of such a Repository, most teams favored calling it a Hardware or Instrumentation Registry. Teams generally agree that this should contain information on device description, schematic diagrams, links to corresponding wiki pages and attribution to the teams that designed the device, device features and characterization data, along with references. Teams generally ranked these items in the importance that is ordered.</p><p>Through conducting this survey, our team has concluded that a standardized repository of hardware devices is a tool that is favored by the iGEM community. We will be transmitting the results of this survey to iGEM HQ, with the hopes that they will begin development on this useful tool.</p></article></div></div></div></main><footer><div class="container"><p>Email: <a href="mailto:igem@oneonta.edu">iGEM@oneonta.edu</a> | <a href="https://suny.oneonta.edu/igem">suny.oneonta.edu/iGEM</a></p></div></footer><script src="https://2021.igem.org/Template:SUNY_Oneonta/content-bundleJS?action=raw&amp;ctype=text/javascript"></script></body></html>

Latest revision as of 03:34, 22 October 2021

Hardware Registry | iGEM SUNY_Oneonta

Hardware Registry


Assessing Interest in Creation of an iGEM Hardware Registry

In our two years competing in iGEM, we have attempted to research various hardware items produced by other teams throughout the years of the competition. We intended on using the designs of other teams as a starting point for creating our own devices, much in the way teams use parts created by other teams to create biological circuits.

Through our efforts, we have come to find it unnecessarily difficult to locate, digest, and effectively utilize data that pertains to hardware devices. This difficulty is due to the lack of a central location housing device designs, forcing teams to search through individual wiki pages. The work is complicated by the lack of a search engine that can filter devices by name or type, and a lack of standardization when it comes to information about devices being distributed.

Given that iGEM has a Parts Registry for Biological Parts and Devices, we set out to investigate the usefulness of a similar registry for Hardware devices. Our goal was to gauge if the iGEM community has interest in such a registry, parameters of such a registry, and what types of standardized information should be included in this registry. We hope that such information might inspire the creation of a registry prototype on the iGEM server for use in upcoming competition cycles.

The survey that we designed initially contained 7 questions. We invited iGEM teams to participate in the survey through the 2021 iGEM Collaboration’s web page, directly emailing teams we have collaborated with on other projects, and through social media. As of 10/14/2021 15 teams logged answers to survey questions. We should note here that it is likely that more teams attempted to take our survey than were logged. The reason for this is that we accidentally misset conditions on one of the questions. This mistake led to teams that indicated that that they were not building a hardware device for the 2021 competition to be closed out of the survey. When we discovered the mistake, we removed this question to permit all teams to access the survey questions.

Survey Results

Question 1: How many years has your team competed in iGEM?

Question 2: Would a Hardware repository be useful to your team?

Question 3: Question 3: If you answered yes or maybe to the previous question, should entering data be a competition requirement or on a voluntary basis?

Question 4: Ranked choice - What should a Hardware Repository be named?

Question 5: Choose all that apply, and rank the importance - What fields should be included in a Hardware Repository?

Question 6: Ranked choice – Rank the importance of each field that might be included in a Hardware Repository.

Participants were also provided a free response section to include any additional comments. No responses were logged.

Conclusions regarding interest in a Hardware Repository

From the results of our survey, most of the teams that participated in the survey are interested in the development of a Hardware Repository and might make use of this tool. The majority of participants believe that participation in such a database should be voluntary. When it comes to the build of such a Repository, most teams favored calling it a Hardware or Instrumentation Registry. Teams generally agree that this should contain information on device description, schematic diagrams, links to corresponding wiki pages and attribution to the teams that designed the device, device features and characterization data, along with references. Teams generally ranked these items in the importance that is ordered.

Through conducting this survey, our team has concluded that a standardized repository of hardware devices is a tool that is favored by the iGEM community. We will be transmitting the results of this survey to iGEM HQ, with the hopes that they will begin development on this useful tool.