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| − | <!-- # TODO: #6 Fix table caption font--><!-- # TODO: #7 Fix citations links font size--><html lang="en"><head><meta charset="utf-8"/><meta content="width=device-width,initial-scale=1" name="viewport"/><title>Contribution | iGEM UNILA_LatAm</title><script src="https://2020.igem.org/common/MathJax-2.5-latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script><link href="https://2021.igem.org/Template:UNILA_LatAm/css/contentCSS?action=raw&ctype=text/css" rel="stylesheet"/></head><body><!-- # TODO: #6 Fix table caption font--><!-- # TODO: #7 Fix citations links font size--><nav class="navbar navbar-expand-xl fixed-top"><div class="container d-flex justify-content-between"><a class="navbar-brand d-lg-inline-block" href="https://2021.igem.org/Team:UNILA_LatAm"><img ;="" src="https://static.igem.org/mediawiki/2021/9/98/T--UNILA_LatAm--Logo.png" style="width:auto; height:100px ;position: relative !important; margin-top:15px; right: 300px"/></a><button aria-controls="navbarNav" aria-expanded="false" aria-label="Toggle navigation" class="navbar-toggler" data-target="#navbarNav" data-toggle="collapse" type="button"><span class="navbar-toggler-icon"></span></button><div class="collapse navbar-collapse" id="navbarNav"><ul class="navbar-nav ml-auto"><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarProjectDropdown" role="button">Project</a><div aria-labelledby="navbarProjectDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Description">Description</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Design_Overview">Design Overview</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Background">Background</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Engineering">Engineering</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Contribution">Contribution</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarDryLabDropdown" role="button">DryLab</a><div aria-labelledby="navbarDryLabDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Design">Design</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Model">Model</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarWetLabDropdown" role="button">WetLab</a><div aria-labelledby="navbarWetLabDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Experiments">Experiments</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Results">Results</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Notebook">Notebook</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Protocols">Protocols</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Parts">Parts</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Safety">Safety</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarHuman PracticesDropdown" role="button">Human Practices</a><div aria-labelledby="navbarHuman PracticesDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Human_Practices">Introduction</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Sustainability">Sustainability</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Implementation">Implementation</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Fighting_Underreporting">Fighting Underreporting</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Integrated_Human_Practices">Integrated Human Practices</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Education">Education</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Inclusivity">Inclusivity</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Communication">Communication</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Funding">Funding</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarTeamDropdown" role="button">Team</a><div aria-labelledby="navbarTeamDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Team">Team Members</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Attributions">Attributions</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Collaborations">Collaborations</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Partnership">Partnership</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Sponsors">Sponsors</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarAwardsDropdown" role="button">Awards</a><div aria-labelledby="navbarAwardsDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Medal_Criteria">Medal Criteria</a></div></li></ul></div></div></nav><header class="d-flex justify-content-center align-items-center"><div class="container"><h1>Contribution</h1><p class="lead pl-1"></p><hr class="my-4"/></div></header><main><div class="container"><div class="row"><div class="sidebar col-lg-3"><div class="nav" id="contents"><h5>Contents</h5><ul></ul></div></div><div class="content col-lg-9"><article><h1>Parts</h1><p>We added information to two parts in the registry:</p><p><a href="http://parts.igem.org/Part:BBa_K2486108">http://parts.igem.org/Part:BBa_K2486108</a>.<br/><a href="http://parts.igem.org/Part:BBa_K2577001">http://parts.igem.org/Part:BBa_K2577001</a>.</p><p>Both parts encodes Dermaseptins, a type of Antimicrobial Peptide (AMP) derived from frogs. We included information from the literature for use and biology of the parts.</p><h1>How to fund</h1><p>Funding is a challenge for all iGEM teams, but for teams from developing countries, it’s a challenge even harder to complete. That is why the SynFronteras Team elaborated a report that can help teams who are struggling with this topic or may be a little lost on how to begin. You can find the document <a href="https://static.igem.org/mediawiki/2021/b/bd/T--UNILA_LatAM--How_to_fund.pdf">here</a>.</p><h1> Potential Cell Lysis Mechanisms for Bacillus subtilis Table</h1><p>In the partnership with team FCB-UANL, we created a table of potential cell lysis mechanisms for Bacillus subtilis. This table can be used by future teams that want to work with this chassis. You can access the table <a href="https://zenodo.org/record/5553126#.YXBAK-rMJH5">here</a>.</p><h1>Software</h1><p>We chose to work with a ToeHold RNA Switch in our project, but the available platforms for the design of the Toehold were not covering all the aspects necessary for us. That’s why we improved the x and y softwares to be able to z.</p></article></div></div></div></main><footer><div class="container" id="contfoot"><div id="div1" ><br/><p> BioPank is a project developed by</p>< p>the Syn Fronteras team</ p>< br/><br/><br/><p id="text1">Contact</p><p>synfronteras@gmail.com</p></div><div id="div2"><p id="fow">Follow us!</p><img height="30px" src="https://static.igem.org/mediawiki/2021/c/c9/T--UNILA_LatAM--fb.png" weight="30px"/><a href="https://www.facebook.com/synfronteras/">/synfronteras<br/></a><img height="30px" src="https://static.igem.org/mediawiki/2021/2/2c/T--UNILA_LatAM--ig.png" weight="30px"/><a href="https://www.instagram.com/igem_synfronteras/">@igem_synfronteras<br/></a><img height="30px" src="https://static.igem.org/mediawiki/2021/1/19/T--UNILA_LatAM--in.png" weight="30px"/><a href="https://br.linkedin.com/in/synfronteras-igem-team-77a7891ba">SynFronteras iGEM Team<br/></a><img height="30px" src="https://static.igem.org/mediawiki/2021/2/27/T--UNILA_LatAM--tw.png" weight="30px"/><a href="https://twitter.com/synfronteras">@synfronteras<br/></a><img height="30px" src="https://static.igem.org/mediawiki/2021/0/02/T--UNILA_LatAM--yt.png" weight="30px"/><a href="https://www.youtube.com/channel/UCHGAVNbPReEbzdEHeansZQg">SynFronteras-UNILA<br/></a></div></div></footer><script src="https://2021.igem.org/Template:UNILA_LatAm/content-bundleJS?action=raw&ctype=text/javascript"></script></body></html> | + | <!-- # TODO: #6 Fix table caption font--><!-- # TODO: #7 Fix citations links font size--><html lang="en"><head><meta charset="utf-8"/><meta content="width=device-width,initial-scale=1" name="viewport"/><title>Contribution | iGEM UNILA_LatAm</title><script src="https://2020.igem.org/common/MathJax-2.5-latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script><link href="https://2021.igem.org/Template:UNILA_LatAm/css/contentCSS?action=raw&ctype=text/css" rel="stylesheet"/></head><body><!-- # TODO: #6 Fix table caption font--><!-- # TODO: #7 Fix citations links font size--><nav class="navbar navbar-expand-xl fixed-top"><div class="container d-flex justify-content-between"><a class="navbar-brand d-lg-inline-block" href="https://2021.igem.org/Team:UNILA_LatAm"><img ;="" src="https://static.igem.org/mediawiki/2021/9/98/T--UNILA_LatAm--Logo.png" style="width:auto; height:100px ;position: relative !important; margin-top:15px; right: 300px"/></a><button aria-controls="navbarNav" aria-expanded="false" aria-label="Toggle navigation" class="navbar-toggler" data-target="#navbarNav" data-toggle="collapse" type="button"><span class="navbar-toggler-icon"></span></button><div class="collapse navbar-collapse" id="navbarNav"><ul class="navbar-nav ml-auto"><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarProjectDropdown" role="button">Project</a><div aria-labelledby="navbarProjectDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Description">Description</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Design_Overview">Design Overview</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Background">Background</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Engineering">Engineering</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Contribution">Contribution</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarDryLabDropdown" role="button">DryLab</a><div aria-labelledby="navbarDryLabDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Design">Design</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Model">Model</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarWetLabDropdown" role="button">WetLab</a><div aria-labelledby="navbarWetLabDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Experiments">Experiments</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Results">Results</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Notebook">Notebook</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Protocols">Protocols</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Parts">Parts</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Safety">Safety</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarHuman PracticesDropdown" role="button">Human Practices</a><div aria-labelledby="navbarHuman PracticesDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Human_Practices">Introduction</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Sustainability">Sustainability</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Implementation">Implementation</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Fighting_Underreporting">Fighting Underreporting</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Integrated_Human_Practices">Integrated Human Practices</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Education">Education</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Inclusivity">Inclusivity</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Communication">Communication</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Funding">Funding</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarTeamDropdown" role="button">Team</a><div aria-labelledby="navbarTeamDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Team">Team Members</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Attributions">Attributions</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Collaborations">Collaborations</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Partnership">Partnership</a><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Sponsors">Sponsors</a></div></li><li class="nav-item dropdown"><a aria-expanded="false" aria-haspopup="true" class="nav-link dropdown-toggle" data-toggle="dropdown" href="#" id="navbarAwardsDropdown" role="button">Awards</a><div aria-labelledby="navbarAwardsDropdown" class="dropdown-menu"><a class="dropdown-item" href="https://2021.igem.org/Team:UNILA_LatAm/Medal_Criteria">Medal Criteria</a></div></li></ul></div></div></nav><header class="d-flex justify-content-center align-items-center"><div class="container"><h1>Contribution</h1><p class="lead pl-1"></p><hr class="my-4"/></div></header><main><div class="container"><div class="row"><div class="sidebar col-lg-3"><div class="nav" id="contents"><h5>Contents</h5><ul></ul></div></div><div class="content col-lg-9"><article><h1>Parts</h1><p>We added information to two parts in the registry:</p><p><a href="http://parts.igem.org/Part:BBa_K2486108">http://parts.igem.org/Part:BBa_K2486108</a>.<br/><a href="http://parts.igem.org/Part:BBa_K2577001">http://parts.igem.org/Part:BBa_K2577001</a>.</p><p>Both parts encodes Dermaseptins, a type of Antimicrobial Peptide (AMP) derived from frogs. We included information from the literature for use and biology of the parts.</p><h1>How to fund</h1><p>Funding is a challenge for all iGEM teams, but for teams from developing countries, it's a challenge even harder to complete. That is why the SynFronteras Team elaborated a report that can help teams who are struggling with this topic or may be a little lost on how to begin. You can find the document <a href="https://static.igem.org/mediawiki/2021/b/bd/T--UNILA_LatAM--How_to_fund.pdf">here</a>.</p><h1>Cell Lysis Mechanisms Table</h1><p>In the partnership with team FCB-UANL, we created a table of potential cell lysis mechanisms for Bacillus subtilis. This table can be used by future teams that want to work with this chassis. You can access the table <a href="https://zenodo.org/record/5553126#.YXBAK-rMJH5">here</a>.</p><h1>Software</h1><p>We chose to work with a ToeHold RNA Switch in our project, but the available platforms for the Toehold 's design did not cover all the aspects necessary for us. That's why we created the python-based Carpincho Tool Toehold Designer to design our Toehold Switches based on thermodynamic values using the NUPACK package (<a href="https://github.com/igemsoftware2021/CarpinchoToeholdDesigner">check here</a>).</p></article></div></div></div></main><footer><div class="container" id="contfoot"><div id="div1"><p id="descri"> A Project by</p>< br/>< img height="100px" src="https://static.igem.org/mediawiki/2021/d/dc/T--UNILA_LatAM--LogoV3.png" weight="100px"/><br/><br/><p id="text1">Contact</p><p>synfronteras@gmail.com</p></div><div id="div2 "><p id="spon">Sponsor</p><br/><a href="https://www.itaipu.gov.br/"><img height="150px" id="spons" src="https://static.igem.org/mediawiki/2021/8/89/T--UNILA_LatAM--LogoIPH.png" weight="150px"/></a></div><div id="div3"><p id="fow">Follow us!</p ><br/><img height="30px " id="aa" src="https://static.igem.org/mediawiki/2021/c/c9/T--UNILA_LatAM--fb.png" weight="30px"/><a href="https://www.facebook.com/synfronteras/">/synfronteras<br/></a><img height="30px" src="https://static.igem.org/mediawiki/2021/2/2c/T--UNILA_LatAM--ig.png" weight="30px"/><a href="https://www.instagram.com/igem_synfronteras/">@igem_synfronteras<br/></a><img height="30px" src="https://static.igem.org/mediawiki/2021/1/19/T--UNILA_LatAM--in.png" weight="30px"/><a href="https://br.linkedin.com/in/synfronteras-igem-team-77a7891ba">SynFronteras iGEM Team<br/></a><img height="30px" src="https://static.igem.org/mediawiki/2021/2/27/T--UNILA_LatAM--tw.png" weight="30px"/><a href="https://twitter.com/synfronteras">@synfronteras<br/></a><img height="30px" src="https://static.igem.org/mediawiki/2021/0/02/T--UNILA_LatAM--yt.png" weight="30px"/><a href="https://www.youtube.com/channel/UCHGAVNbPReEbzdEHeansZQg">SynFronteras-UNILA<br/></a></div></div></footer><script src="https://2021.igem.org/Template:UNILA_LatAm/content-bundleJS?action=raw&ctype=text/javascript"></script></body></html> |
